RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 FCRL2Q96LA5 508 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-207ENST00000488934 DRC1Q96MC2 740 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 ADPGKQ9BRR6 497 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 TRIM6Q9C030 488 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-207ENST00000488934 TMEM117Q9H0C3 514 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 POLR3FQ9H1D9 316 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-207ENST00000488934 BHMT2Q9H2M3 363 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 TMX1Q9H3N1 280 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 CERS4Q9HA82 394 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 IFT122Q9HBG6 1241 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 AGPAT5Q9NUQ2 364 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 DDX19AQ9NUU7 478 aaKnown RBP5.63□□□□□ -1.51
SF3A3-207ENST00000488934 PRMT7Q9NVM4 692 aaPredicted RBP5.63□□□□□ -1.51
SF3A3-207ENST00000488934 GFOD1Q9NXC2 390 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 THEGQ9P2T0 379 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 STK39Q9UEW8 545 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 PPT2Q9UMR5 302 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 COG5Q9UP83 839 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 CNTNAP2Q9UHC6 1331 aa5.63□□□□□ -1.51
SF3A3-207ENST00000488934 PRRC2BQ5JSZ5 2229 aaKnown RBP5.63□□□□□ -1.51
SF3A3-207ENST00000488934 PLXNA4Q9HCM2 1894 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 FAM86C2PA6NEL3 165 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 LRRIQ4A6NIV6 560 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 TBKBP1A7MCY6 615 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 H0YCG3 227 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 MGEA5O60502 916 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 SRGAP2BP0DMP2 458 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 IBSPP21815 317 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 TRHRP34981 398 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 ARL2P36404 184 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 UBA7P41226 1012 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 SOX9P48436 509 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 EFNA5P52803 228 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 PTENP60484 403 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 FAM189BP81408 668 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 RBM10P98175 930 aaKnown RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 KRT17Q04695 432 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 GPM6BQ13491 265 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 CAPSQ13938 189 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 SF3A1Q15459 793 aaKnown RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 ZNF124Q15973 351 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 MAPK6Q16659 721 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 HYIQ5T013 277 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 FAM102BQ5T8I3 360 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 CDCA2Q69YH5 1023 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 ATL3Q6DD88 541 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 CEP128Q6ZU80 1094 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 RTN4RL1Q86UN2 441 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 LSRQ86X29 649 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 ECHDC2Q86YB7 292 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 KRTAP1-3Q8IUG1 177 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 RNF169Q8NCN4 708 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 DEPTORQ8TB45 409 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 URGCPQ8TCY9 931 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 CPLX3Q8WVH0 158 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 ATXN2LQ8WWM7 1075 aaKnown RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 MRPL38Q96DV4 380 aaKnown RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 ZNF668Q96K58 619 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 ZNF396Q96N95 335 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 C17orf80Q9BSJ5 609 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 TGIF2Q9GZN2 237 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 CCSER2Q9H7U1 834 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 XPNPEP1Q9NQW7 623 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 LARSQ9P2J5 1176 aaKnown RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 TNFRSF10DQ9UBN6 386 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 PUF60Q9UHX1 559 aaKnown RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 MTUS1Q9ULD2 1270 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 LZTS1Q9Y250 596 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 EFR3BQ9Y2G0 817 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 ZNF281Q9Y2X9 895 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 MTCH2Q9Y6C9 303 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 MORC2Q9Y6X9 1032 aaPredicted RBP5.62□□□□□ -1.51
SF3A3-207ENST00000488934 ZMYM2Q9UBW7 1377 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 ATG2AQ2TAZ0 1938 aa5.62□□□□□ -1.51
SF3A3-207ENST00000488934 CITO14578 2027 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 N4BP3O15049 544 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 NRDCO43847 1150 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 TSPAN1O60635 241 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 ZNF623O75123 536 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 FGFR1P11362 822 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 ITGA4P13612 1032 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 NCLP19338 710 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 FGFR4P22455 802 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 GLRA2P23416 452 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 NOP2P46087 812 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 ALDH7A1P49419 539 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 RNASELQ05823 741 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 MBTD1Q05BQ5 628 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 RESTQ13127 1097 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 PRPF4BQ13523 1007 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 BECN1Q14457 450 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 TCEAL1Q15170 157 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 ZRSR1Q15695 479 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 FAM187BQ17R55 369 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 PAN2Q504Q3 1202 aaKnown RBP5.61□□□□□ -1.51
SF3A3-207ENST00000488934 ANKRD39Q53RE8 183 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 GALNT18Q6P9A2 607 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 SLC27A1Q6PCB7 646 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 UNC5AQ6ZN44 842 aa5.61□□□□□ -1.51
SF3A3-207ENST00000488934 CABP7Q86V35 215 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms