RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 HPS3Q969F9 1004 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 HPDLQ96IR7 371 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 SLC8A2Q9UPR5 921 aa19.73■□□□□ 0.75
HDAC6-231ENST00000488905 ZNF233A6NK53 670 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 STX6O43752 255 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 FOXD2O60548 495 aaPredicted RBP19.72■□□□□ 0.75
HDAC6-231ENST00000488905 RPP40O75818 363 aaKnown RBP19.72■□□□□ 0.75
HDAC6-231ENST00000488905 GJA4P35212 333 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 STK38Q15208 465 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 SURF1Q15526 300 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 E2F4Q16254 413 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 NAIF1Q69YI7 327 aaPredicted RBP19.72■□□□□ 0.75
HDAC6-231ENST00000488905 FSIP1Q8NA03 581 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 TTC16Q8NEE8 873 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 NUP205Q92621 2012 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 ATP2A3Q93084 1043 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 MYLPFQ96A32 169 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 EXOC4Q96A65 974 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 P2RY13Q9BPV8 354 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 TRIM9Q9C026 710 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 ECT2Q9H8V3 914 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 DUS2Q9NX74 493 aaKnown RBP19.72■□□□□ 0.75
HDAC6-231ENST00000488905 HSPBP1Q9NZL4 362 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 CDH9Q9ULB4 789 aa19.72■□□□□ 0.75
HDAC6-231ENST00000488905 MAP1BP46821 2468 aaKnown RBP19.71■□□□□ 0.75
HDAC6-231ENST00000488905 C2orf78A6NCI8 922 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 EIF3DO15371 548 aaKnown RBP eCLIP19.71■□□□□ 0.75
HDAC6-231ENST00000488905 ATP2C2O75185 946 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 IFNAR2P48551 515 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 KCNB1Q14721 858 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 DUOXA2Q1HG44 320 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 FBXO43Q4G163 708 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 VSTM1Q6UX27 236 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 WDR49Q8IV35 697 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 LINC00301Q8NCQ3 95 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 CYP2S1Q96SQ9 504 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 LRRC27Q9C0I9 530 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 CUEDC2Q9H467 287 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 FBRSL1Q9HCM7 1045 aaKnown RBP19.71■□□□□ 0.75
HDAC6-231ENST00000488905 CRTAC1Q9NQ79 661 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 FOXD4L1Q9NU39 408 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 KBTBD4Q9NVX7 518 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 GCNT4Q9P109 453 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 WNT6Q9Y6F9 365 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 KMT2BQ9UMN6 2715 aaPredicted RBP19.71■□□□□ 0.75
HDAC6-231ENST00000488905 MYOFQ9NZM1 2061 aa19.71■□□□□ 0.75
HDAC6-231ENST00000488905 GDF9O60383 454 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 EPN2O95208 641 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 CCDC192P0DO97 292 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 WARSP23381 471 aaKnown RBP19.7■□□□□ 0.74
HDAC6-231ENST00000488905 LMO2P25791 158 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 HOXD13P35453 343 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 GALK1P51570 392 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 ASIC1P78348 528 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 MAPRE1Q15691 268 aaKnown RBP19.7■□□□□ 0.74
HDAC6-231ENST00000488905 EML3Q32P44 896 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 CACNA2D4Q7Z3S7 1137 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 ARL14EPQ8N8R7 260 aaPredicted RBP19.7■□□□□ 0.74
HDAC6-231ENST00000488905 SH3RF2Q8TEC5 729 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 LOXL4Q96JB6 756 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 SPATA17Q96L03 361 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 KIAA1586Q9HCI6 787 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 MAGEC2Q9UBF1 373 aaPredicted RBP19.7■□□□□ 0.74
HDAC6-231ENST00000488905 MYH10P35580 1976 aa19.7■□□□□ 0.74
HDAC6-231ENST00000488905 SPTLC2O15270 562 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 AKAP3O75969 853 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 TCF3P15923 654 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 BDNFP23560 247 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 RAP1GAPP47736 663 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 SNRNP35Q16560 246 aaKnown RBP19.69■□□□□ 0.74
HDAC6-231ENST00000488905 PPM1JQ5JR12 505 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 EPM2AIP1Q7L775 607 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-231ENST00000488905 KBTBD6Q86V97 674 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 CAMKK1Q8N5S9 505 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 RPLP0P6Q8NHW5 317 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 CD101Q93033 1021 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 CEP295NLQ96MC4 621 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 CNTNAP3BQ96NU0 1288 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 HHIPQ96QV1 700 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 CNTNAP3Q9BZ76 1288 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 ARRDC1-AS1Q9H2J1 176 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 POLR3BQ9NW08 1133 aaPredicted RBP19.69■□□□□ 0.74
HDAC6-231ENST00000488905 ARHGAP26Q9UNA1 814 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 UBE4BO95155 1302 aa19.69■□□□□ 0.74
HDAC6-231ENST00000488905 K7ELQ4 463 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-231ENST00000488905 AXIN1O15169 862 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 PPP6R2O75170 966 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 ADRB1P08588 477 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 PDE6CP51160 858 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 CYP27A1Q02318 531 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 AASDHQ4L235 1098 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-231ENST00000488905 FAM26FQ5R3K3 315 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 DENND5BQ6ZUT9 1274 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 TRAPPC11Q7Z392 1133 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 EZH1Q92800 747 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-231ENST00000488905 ACDQ96AP0 544 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 DHX58Q96C10 678 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 PCED1BQ96HM7 432 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 MMS19Q96T76 1030 aa19.68■□□□□ 0.74
HDAC6-231ENST00000488905 AGPAT3Q9NRZ7 376 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms