RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 VIMP08670 466 aaKnown RBP19.32■□□□□ 0.68
COL16A1-215ENST00000488897 AKAP5P24588 427 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 LIG4P49917 911 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 KRT17Q04695 432 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 CNGA2Q16280 664 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 SCARA3Q6AZY7 606 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 LINC01599Q8WXQ3 324 aa19.32■□□□□ 0.68
COL16A1-215ENST00000488897 CDC42EP4Q9H3Q1 356 aaKnown RBP19.32■□□□□ 0.68
COL16A1-215ENST00000488897 ACKR2O00590 384 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 DLATP10515 647 aaKnown RBP19.31■□□□□ 0.68
COL16A1-215ENST00000488897 WNT7BP56706 349 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 ATF7IP2Q5U623 682 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 TWF2Q6IBS0 349 aaKnown RBP19.31■□□□□ 0.68
COL16A1-215ENST00000488897 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.31■□□□□ 0.68
COL16A1-215ENST00000488897 EXOC3L1Q86VI1 746 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 TAS1R2Q8TE23 839 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 GRK7Q8WTQ7 553 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 FBXL18Q96ME1 805 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 ADAM2Q99965 735 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 PDZD7Q9H5P4 517 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 KLK14Q9P0G3 267 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 PRKAG2Q9UGJ0 569 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 UPP2O95045 317 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 NPTXRO95502 500 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 SLC1A1P43005 524 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 CAV1Q03135 178 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 ENPEPQ07075 957 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 FAM26DQ5JW98 314 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 RPAINQ86UA6 219 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 MAGEC3Q8TD91 643 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 C1orf54Q8WWF1 131 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 SNF8Q96H20 258 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 POP1Q99575 1024 aaKnown RBP19.31■□□□□ 0.68
COL16A1-215ENST00000488897 ELAC2Q9BQ52 826 aaKnown RBP19.31■□□□□ 0.68
COL16A1-215ENST00000488897 AVENQ9NQS1 362 aaPredicted RBP19.31■□□□□ 0.68
COL16A1-215ENST00000488897 ASIC3Q9UHC3 531 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 ANAPC7Q9UJX3 599 aa19.31■□□□□ 0.68
COL16A1-215ENST00000488897 PITPNM1O00562 1244 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 RHBDF2Q6PJF5 856 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 ELMO3Q96BJ8 720 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 NXF3Q9H4D5 531 aaKnown RBP19.3■□□□□ 0.68
COL16A1-215ENST00000488897 CD248Q9HCU0 757 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.3■□□□□ 0.68
COL16A1-215ENST00000488897 REV3LO60673 3130 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 KIAA0355O15063 1070 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 ZC3H11AO75152 810 aaKnown RBP eCLIP19.3■□□□□ 0.68
COL16A1-215ENST00000488897 MYBL1P10243 752 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 GCNT1Q02742 428 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 PTK6Q13882 451 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 TSHZ1Q6ZSZ6 1077 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 SV2AQ7L0J3 742 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 POMGNT1Q8WZA1 660 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 FAM212AQ96EL1 285 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 TRIM11Q96F44 468 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 NCAPGQ9BPX3 1015 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 AAASQ9NRG9 546 aa19.3■□□□□ 0.68
COL16A1-215ENST00000488897 GAS8O95995 478 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 KRT5P13647 590 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 SCP2P22307 547 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 GATMP50440 423 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 EFNA5P52803 228 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 GSCP56915 257 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-215ENST00000488897 CYP24A1Q07973 514 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 ARHGEF2Q92974 986 aaKnown RBP19.29■□□□□ 0.68
COL16A1-215ENST00000488897 TMEM134Q9H6X4 195 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 CACNG4Q9UBN1 327 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 ABLIM1O14639 778 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 SNX1Q13596 522 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 LONRF1Q17RB8 773 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 UBXN11Q5T124 520 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 LMBRD2Q68DH5 695 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-215ENST00000488897 TRPM8Q7Z2W7 1104 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 ZNF677Q86XU0 584 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 MCOLN2Q8IZK6 566 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 DYDC1Q8WWB3 177 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 FAM213AQ9BRX8 229 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 TACO1Q9BSH4 297 aaKnown RBP19.29■□□□□ 0.68
COL16A1-215ENST00000488897 HTATIP2Q9BUP3 242 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 DDX23Q9BUQ8 820 aaKnown RBP19.29■□□□□ 0.68
COL16A1-215ENST00000488897 MRPL4Q9BYD3 311 aaKnown RBP19.29■□□□□ 0.68
COL16A1-215ENST00000488897 CXXC1Q9P0U4 656 aaPredicted RBP19.29■□□□□ 0.68
COL16A1-215ENST00000488897 SLC12A4Q9UP95 1085 aa19.29■□□□□ 0.68
COL16A1-215ENST00000488897 TP73O15350 636 aa19.28■□□□□ 0.68
COL16A1-215ENST00000488897 ACSL3O95573 720 aa19.28■□□□□ 0.68
COL16A1-215ENST00000488897 TTC4O95801 387 aa19.28■□□□□ 0.68
COL16A1-215ENST00000488897 UNGP13051 313 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-215ENST00000488897 IFNAR2P48551 515 aa19.28■□□□□ 0.68
COL16A1-215ENST00000488897 CCDC38Q502W7 563 aa19.28■□□□□ 0.68
COL16A1-215ENST00000488897 C2orf40Q9H1Z8 148 aa19.28■□□□□ 0.68
COL16A1-215ENST00000488897 CDT1Q9H211 546 aa19.28■□□□□ 0.68
COL16A1-215ENST00000488897 TOPORSQ9NS56 1045 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-215ENST00000488897 PRMT7Q9NVM4 692 aaPredicted RBP19.28■□□□□ 0.68
COL16A1-215ENST00000488897 A0A1B0GUA9 196 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 PLEKHG4Q58EX7 1191 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 ZNF365Q70YC5 407 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 GPD1LQ8N335 351 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 ATL2Q8NHH9 583 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 TRAIPQ9BWF2 469 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 NFKBIZQ9BYH8 718 aa19.27■□□□□ 0.68
COL16A1-215ENST00000488897 DCLK3Q9C098 648 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms