RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 ZFP37Q9Y6Q3 630 aaPredicted RBP19.83■□□□□ 0.77
PTCD3-217ENST00000488801 CLDN5O00501 218 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 CCDC130P13994 396 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 CEBPBP17676 345 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 SP100P23497 879 aaPredicted RBP19.82■□□□□ 0.76
PTCD3-217ENST00000488801 PON1P27169 355 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 ZNF132P52740 706 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 VEPH1Q14D04 833 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 IQCB1Q15051 598 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 DDR2Q16832 855 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 SDHAF4Q5VUM1 108 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 GBP6Q6ZN66 633 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 PDZD4Q76G19 769 aaPredicted RBP19.82■□□□□ 0.76
PTCD3-217ENST00000488801 TMEM150AQ86TG1 271 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 PLCD3Q8N3E9 789 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 AOPEPQ8N6M6 819 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 C12orf29Q8N999 325 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 SHKBP1Q8TBC3 707 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 SMARCD1Q96GM5 515 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 HNRNPABQ99729 332 aaKnown RBP19.82■□□□□ 0.76
PTCD3-217ENST00000488801 CRACR2AQ9BSW2 395 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 NAT10Q9H0A0 1025 aaKnown RBP19.82■□□□□ 0.76
PTCD3-217ENST00000488801 CSNK1G1Q9HCP0 422 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 LIMA1Q9UHB6 759 aaKnown RBP19.82■□□□□ 0.76
PTCD3-217ENST00000488801 CDH7Q9ULB5 785 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 CNTN6Q9UQ52 1028 aa19.82■□□□□ 0.76
PTCD3-217ENST00000488801 ATP8B3O60423 1300 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 TRIM66O15016 1216 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 TADA3O75528 432 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 CSH1P0DML2 217 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 CSH2P0DML3 217 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 LAMP2P13473 410 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 SLC9A1P19634 815 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 YWHAEP62258 255 aaKnown RBP19.81■□□□□ 0.76
PTCD3-217ENST00000488801 EXOC3L4Q17RC7 722 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 PPM1KQ8N3J5 372 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 STKLD1Q8NE28 680 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 ZMIZ2Q8NF64 920 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 SLC2A14Q8TDB8 520 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 GPR152Q8TDT2 470 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 KHSRPQ92945 711 aaKnown RBP eCLIP19.81■□□□□ 0.76
PTCD3-217ENST00000488801 JAKMIP2Q96AA8 810 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 ACSF2Q96CM8 615 aaPredicted RBP19.81■□□□□ 0.76
PTCD3-217ENST00000488801 TTLL2Q9BWV7 592 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 FAM49BQ9NUQ9 324 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 APEX2Q9UBZ4 518 aa19.81■□□□□ 0.76
PTCD3-217ENST00000488801 MRPS23Q9Y3D9 190 aaKnown RBP19.81■□□□□ 0.76
PTCD3-217ENST00000488801 LRRC10BA6NIK2 292 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 SLC38A8A6NNN8 435 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 ANHXE9PGG2 379 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 F8VP50 259 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 ZNF197O14709 1029 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 KCNMA1Q12791 1236 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 MTMR3Q13615 1198 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 CYP4A22Q5TCH4 519 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 ARHGAP17Q68EM7 881 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 RNF135Q8IUD6 432 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 CREBRFQ8IUR6 639 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 GIPC2Q8TF65 315 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 TMEM176AQ96HP8 235 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 SMOQ99835 787 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 KRT82Q9NSB4 513 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 TAB2Q9NYJ8 693 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 GDE1Q9NZC3 331 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 COL4A3Q01955 1670 aa19.8■□□□□ 0.76
PTCD3-217ENST00000488801 TNFRSF10BO14763 440 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 FGF19O95750 216 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 F11P03951 625 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 GBP2P32456 591 aaPredicted RBP19.79■□□□□ 0.76
PTCD3-217ENST00000488801 SSTR3P32745 418 aaPredicted RBP19.79■□□□□ 0.76
PTCD3-217ENST00000488801 ZNF165P49910 485 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 APBA1Q02410 837 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 HTR4Q13639 388 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 PPP1R26Q5T8A7 1209 aaPredicted RBP19.79■□□□□ 0.76
PTCD3-217ENST00000488801 CLEC20AQ6ZU45 233 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 RRAGAQ7L523 313 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 ENOSF1Q7L5Y1 443 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 SCN4BQ8IWT1 228 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 FAM200AQ8TCP9 573 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 ING5Q8WYH8 240 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 CYFIP2Q96F07 1278 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 DMAP1Q9NPF5 467 aaPredicted RBP19.79■□□□□ 0.76
PTCD3-217ENST00000488801 IL37Q9NZH6 218 aa19.79■□□□□ 0.76
PTCD3-217ENST00000488801 MIA3Q5JRA6 1907 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 KMT2EQ8IZD2 1858 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 FAM92AA1XBS5 289 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 TNFRSF10AO00220 468 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 BEST1O76090 585 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 PAEPP09466 180 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 MYL4P12829 197 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 ATP1A3P13637 1013 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 TRIM21P19474 475 aaKnown RBP19.78■□□□□ 0.76
PTCD3-217ENST00000488801 GRIK1P39086 918 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 COPB1P53618 953 aaKnown RBP19.78■□□□□ 0.76
PTCD3-217ENST00000488801 USP46P62068 366 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 ZNF394Q53GI3 561 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 FAM81BQ96LP2 452 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 KCNK16Q96T55 309 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 PNPLA8Q9NP80 782 aa19.78■□□□□ 0.76
PTCD3-217ENST00000488801 AJAP1Q9UKB5 411 aaPredicted RBP19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms