RNA–Protein interactions for RNA: ENST00000488683.1

CLIC4-202, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 2,723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-202ENST00000488683 CBX6O95503 412 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 LSM8O95777 96 aaKnown RBP13.31□□□□□ -0.28
CLIC4-202ENST00000488683 VTNP04004 478 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 RPL22P35268 128 aaKnown RBP13.31□□□□□ -0.28
CLIC4-202ENST00000488683 CDCA2Q69YH5 1023 aaPredicted RBP13.31□□□□□ -0.28
CLIC4-202ENST00000488683 DRICH1Q6PGQ1 229 aaPredicted RBP13.31□□□□□ -0.28
CLIC4-202ENST00000488683 FBXO36Q8NEA4 188 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 SEPT1Q8WYJ6 367 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 ERP27Q96DN0 273 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 CEP83Q9Y592 693 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 ABHD2P08910 425 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 NQO1P15559 274 aaKnown RBP13.31□□□□□ -0.28
CLIC4-202ENST00000488683 SLC25A11Q02978 314 aaKnown RBP13.31□□□□□ -0.28
CLIC4-202ENST00000488683 MCL1Q07820 350 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 TMEM62Q0P6H9 643 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 MAPK6Q16659 721 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 SGSM1Q2NKQ1 1148 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 SH3D19Q5HYK7 790 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 LRRC38Q5VT99 294 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 MAP1SQ66K74 1059 aaPredicted RBP13.31□□□□□ -0.28
CLIC4-202ENST00000488683 C1orf127Q8N9H9 656 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 FBF1Q8TES7 1133 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 PRR11Q96HE9 360 aaPredicted RBP13.31□□□□□ -0.28
CLIC4-202ENST00000488683 ELOVL4Q9GZR5 314 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 PRKAG3Q9UGI9 489 aa13.31□□□□□ -0.28
CLIC4-202ENST00000488683 LACTBL1A8MY62 500 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 ASMTLO95671 621 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 GSTA1P08263 222 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 CDH5P33151 784 aaPredicted RBP13.3□□□□□ -0.28
CLIC4-202ENST00000488683 COPS2P61201 443 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 MYO1EQ12965 1108 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 AMHR2Q16671 573 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 GALNTL6Q49A17 601 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 NOL9Q5SY16 702 aaKnown RBP13.3□□□□□ -0.28
CLIC4-202ENST00000488683 ATF7IP2Q5U623 682 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 FAM160B1Q5W0V3 765 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 JADE1Q6IE81 842 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 EFCAB12Q6NXP0 572 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 LVRNQ6Q4G3 990 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 METTL7BQ6UX53 244 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 C3orf62Q6ZUJ4 267 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 KCTD6Q8NC69 237 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 MAGEB18Q96M61 343 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 SPATA33Q96N06 139 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 NPHS2Q9NP85 383 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 PIH1D1Q9NWS0 290 aaKnown RBP13.3□□□□□ -0.28
CLIC4-202ENST00000488683 PCDHGC3Q9UN70 934 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 ARL2BPQ9Y2Y0 163 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 M0QYV0 167 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 UPP2O95045 317 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 EIF4BP23588 611 aaKnown RBP13.3□□□□□ -0.28
CLIC4-202ENST00000488683 MIPP30301 263 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 CETN2P41208 172 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 EFNA5P52803 228 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 ATXN1P54253 815 aaKnown RBP13.3□□□□□ -0.28
CLIC4-202ENST00000488683 RAD23BP54727 409 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 LMNB2Q03252 620 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 PIGHQ14442 188 aaPredicted RBP13.3□□□□□ -0.28
CLIC4-202ENST00000488683 NEDD9Q14511 834 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 SCYL2Q6P3W7 929 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 ARHGEF18Q6ZSZ5 1173 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 RIOX2Q8IUF8 465 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 SLC35B2Q8TB61 432 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 PTPRN2Q92932 1015 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 FGD4Q96M96 766 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 GPR20Q99678 358 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 CCDC77Q9BR77 488 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 SPATC1LQ9H0A9 340 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 ETNK1Q9HBU6 452 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 CHKBQ9Y259 395 aa13.3□□□□□ -0.28
CLIC4-202ENST00000488683 SOCS7O14512 581 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 F7P08709 466 aaPredicted RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 TFE3P19532 575 aaPredicted RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 CYP3A5P20815 502 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 PROZP22891 400 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 KDELR1P24390 212 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 BAG6P46379 1132 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 AP3M2P53677 418 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 GRM1Q13255 1194 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 HIF1AQ16665 826 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 ZC3H12AQ5D1E8 599 aaKnown RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 IER5Q5VY09 327 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 PPP1R2P3Q6NXS1 205 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 AGGF1Q8N302 714 aaeCLIP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 NIPA2Q8N8Q9 360 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 PYROXD1Q8WU10 500 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 RSAD2Q8WXG1 361 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 NKD2Q969F2 451 aaPredicted RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 UTP4Q969X6 686 aaKnown RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 CFAP57Q96MR6 1250 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 CDT1Q9H211 546 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 PTPRHQ9HD43 1115 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 DRG1Q9Y295 367 aaKnown RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 LAMA2P24043 3122 aaKnown RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 OTOFQ9HC10 1997 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 A0A087WZ62 844 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 DDNO94850 711 aaPredicted RBP13.29□□□□□ -0.28
CLIC4-202ENST00000488683 ITGAVP06756 1048 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 PTPN7P35236 360 aa13.29□□□□□ -0.28
CLIC4-202ENST00000488683 MAP2K2P36507 400 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms