RNA–Protein interactions for RNA: ENST00000488155.1

NIPAL3-207, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best)

Gene NIPAL3, Length 931 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-207ENST00000488155 ZNF528Q3MIS6 628 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 CFAP221Q4G0U5 840 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 C4orf50Q6ZRC1 276 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 Q6ZS52 159 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 LIMS2Q7Z4I7 341 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 MON1AQ86VX9 555 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 KIAA2013Q8IYS2 634 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 ARL14EPQ8N8R7 260 aaPredicted RBP12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 SPATA18Q8TC71 538 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 DPEP3Q9H4B8 488 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 C8orf33Q9H7E9 229 aaPredicted RBP12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 GDPD2Q9HCC8 539 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 HPS4Q9NQG7 708 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 TDP1Q9NUW8 608 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 THG1LQ9NWX6 298 aaKnown RBP12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 ZSCAN32Q9NX65 697 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 UXTQ9UBK9 157 aaPredicted RBP12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 SPTBN2O15020 2390 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 NUP205Q92621 2012 aa12.08□□□□□ -0.48
NIPAL3-207ENST00000488155 ZNF292O60281 2723 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 C2orf78A6NCI8 922 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 LRRIQ3A6PVS8 624 aaPredicted RBP12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 A8MXQ7 604 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 CLDN5O00501 218 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 CKMP06732 381 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 ARSAP15289 507 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 DDX6P26196 483 aaKnown RBP eCLIP12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 WEE1P30291 646 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 SYKP43405 635 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 RAP1GAPP47736 663 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 CXCL12P48061 93 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 NDUFA8P51970 172 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 CDH8P55286 799 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 USP46P62068 366 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 SNRPFP62306 86 aaKnown RBP12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 PLCB2Q00722 1185 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 LPAL2Q16609 132 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 ITPRIPL2Q3MIP1 535 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 SCARA5Q6ZMJ2 495 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 RALGPS2Q86X27 583 aaPredicted RBP12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 C12orf56Q8IXR9 622 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 SUMF1Q8NBK3 374 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 PCED1BQ96HM7 432 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 FUBP3Q96I24 572 aaKnown RBP eCLIP12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 SMYD3Q9H7B4 428 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 PRMT8Q9NR22 394 aaPredicted RBP12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 C2orf42Q9NWW7 574 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 CGNQ9P2M7 1197 aaKnown RBP12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 MAPK8IP1Q9UQF2 711 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 HPSEQ9Y251 543 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 PCDHGA2Q9Y5H1 932 aa12.07□□□□□ -0.48
NIPAL3-207ENST00000488155 CEP192Q8TEP8 1941 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 TRAV19A0A0A6YYK7 116 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 OTOL1A6NHN0 477 aaPredicted RBP12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 F8VP50 259 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 ABL1P00519 1130 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 NR3C1P04150 777 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 RPN1P04843 607 aaKnown RBP12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 PTPN1P18031 435 aaKnown RBP12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 ANXA13P27216 316 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 PI4KAP42356 2102 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 MAGEA11P43364 429 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 CCR3P51677 355 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 CACNA2D1P54289 1103 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 DLG4P78352 724 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 DMWDQ09019 674 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 RUNX3Q13761 415 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 LRRC32Q14392 662 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 MAPRE1Q15691 268 aaKnown RBP12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 TDRD10Q5VZ19 366 aaKnown RBP12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 CEP135Q66GS9 1140 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 HEATR6Q6AI08 1181 aaKnown RBP12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 CC2D1AQ6P1N0 951 aaPredicted RBP12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 DENND5BQ6ZUT9 1274 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 FSIP1Q8NA03 581 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 ZBTB44Q8NCP5 570 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 MYCBPAPQ8TBZ2 947 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 PARD3BQ8TEW8 1205 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 RUBCNQ92622 972 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 TRMT2BQ96GJ1 504 aaKnown RBP12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 MYRFLQ96LU7 910 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 FAM83CQ9BQN1 747 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 KCTD10Q9H3F6 313 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 NCDNQ9UBB6 729 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 ZMYM5Q9UJ78 669 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 FRYLO94915 3013 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 DCHS1Q96JQ0 3298 aa12.06□□□□□ -0.48
NIPAL3-207ENST00000488155 CHURC1-FNTBB4DL54 471 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 TACC1O75410 805 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 C4BPAP04003 597 aaKnown RBP12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 USP17L7P0C7H9 530 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 HDCP19113 662 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 FNTBP49356 437 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 MLLT6P55198 1093 aaPredicted RBP12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 FAM160A1Q05DH4 1040 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 PSMD2Q13200 908 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 ORC1Q13415 861 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 NCOA4Q13772 614 aa12.05□□□□□ -0.48
NIPAL3-207ENST00000488155 MTF1Q14872 753 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms