RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 KLHL29Q96CT2 875 aa14.46□□□□□ -0.09
COPS7B-221ENST00000488111 TRIM51Q9BSJ1 452 aa14.46□□□□□ -0.09
COPS7B-221ENST00000488111 TMEM109Q9BVC6 243 aa14.46□□□□□ -0.09
COPS7B-221ENST00000488111 PCDHB2Q9Y5E7 798 aa14.46□□□□□ -0.09
COPS7B-221ENST00000488111 RGS16O15492 202 aaPredicted RBP14.46□□□□□ -0.1
COPS7B-221ENST00000488111 COL6A1P12109 1028 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 MSH2P43246 934 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 YARSP54577 528 aaKnown RBP14.46□□□□□ -0.1
COPS7B-221ENST00000488111 IFI35P80217 286 aaPredicted RBP14.46□□□□□ -0.1
COPS7B-221ENST00000488111 KYAT1Q16773 422 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 THEMIS2Q5TEJ8 643 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 DENND2CQ68D51 928 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 LRRC8DQ7L1W4 858 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 CROCCP2Q86T23 111 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 PPM1KQ8N3J5 372 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 ZMAT2Q96NC0 199 aaKnown RBP14.46□□□□□ -0.1
COPS7B-221ENST00000488111 TMEM106CQ9BVX2 250 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 MCOLN1Q9GZU1 580 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 FAM105AQ9NUU6 356 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 PCDH10Q9P2E7 1040 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 CPSF2Q9P2I0 782 aaKnown RBP14.46□□□□□ -0.1
COPS7B-221ENST00000488111 NENFQ9UMX5 172 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 ATP11BQ9Y2G3 1177 aa14.46□□□□□ -0.1
COPS7B-221ENST00000488111 KRT19P08727 400 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 NEFHP12036 1026 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 SELPP16109 830 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 FERP16591 822 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 FAAP100Q0VG06 881 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 NCOA4Q13772 614 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 CNGA2Q16280 664 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 C6orf118Q5T5N4 469 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 ZNF571Q7Z3V5 609 aaPredicted RBP14.45□□□□□ -0.1
COPS7B-221ENST00000488111 PEX26Q7Z412 305 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 MFN1Q8IWA4 741 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 LPPQ93052 612 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 KIF12Q96FN5 646 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 ANKRD36BP1Q96IX9 119 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 ADAM2Q99965 735 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 OSBPL1AQ9BXW6 950 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 SEZ6LQ9BYH1 1024 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 PPP1R12CQ9BZL4 782 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 A0A0A6YYK5 440 aaPredicted RBP14.45□□□□□ -0.1
COPS7B-221ENST00000488111 EVI5O60447 810 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 PTK2Q05397 1052 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 BFSP2Q13515 415 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 KCTD19Q17RG1 926 aaPredicted RBP14.45□□□□□ -0.1
COPS7B-221ENST00000488111 CWF19L1Q69YN2 538 aaKnown RBP14.45□□□□□ -0.1
COPS7B-221ENST00000488111 SLC30A9Q6PML9 568 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 IRF2BP2Q7Z5L9 587 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 RNF169Q8NCN4 708 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 NAF1Q96HR8 494 aaKnown RBP14.45□□□□□ -0.1
COPS7B-221ENST00000488111 HES6Q96HZ4 224 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 SCLYQ96I15 445 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 ASB7Q9H672 318 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 CHST12Q9NRB3 414 aa14.45□□□□□ -0.1
COPS7B-221ENST00000488111 O00370 1275 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 TLR3O15455 904 aaKnown RBP14.44□□□□□ -0.1
COPS7B-221ENST00000488111 GJB6O95452 261 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 TNNC2P02585 160 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 RPS6KA3P51812 740 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 CCL23P55773 120 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 MYL6P60660 151 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 ATP11AP98196 1134 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 DRAP1Q14919 205 aaPredicted RBP14.44□□□□□ -0.1
COPS7B-221ENST00000488111 TMEM132DQ14C87 1099 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 TAF11Q15544 211 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 CMPK2Q5EBM0 449 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 ANKRD33Q7Z3H0 272 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 NT5DC3Q86UY8 548 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 APLFQ8IW19 511 aaPredicted RBP14.44□□□□□ -0.1
COPS7B-221ENST00000488111 KIF2BQ8N4N8 673 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 SNX27Q96L92 541 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 NT5C1BQ96P26 610 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 ERP44Q9BS26 406 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 NAGPAQ9UK23 515 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 NBNO60934 754 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 SUN1O94901 812 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 AP3M2P53677 418 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 TRPC3Q13507 836 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 GPNMBQ14956 572 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 PTPROQ16827 1216 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 SYCE1Q8N0S2 351 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 C1orf127Q8N9H9 656 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 HELQQ8TDG4 1101 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 KREMEN1Q96MU8 473 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 FAM167BQ9BTA0 163 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 TRIM31Q9BZY9 425 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 GPR88Q9GZN0 384 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 C11orf49Q9H6J7 331 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 APOBEC3GQ9HC16 384 aaKnown RBP14.44□□□□□ -0.1
COPS7B-221ENST00000488111 LRRC42Q9Y546 428 aa14.44□□□□□ -0.1
COPS7B-221ENST00000488111 BZW2Q9Y6E2 419 aaKnown RBP14.44□□□□□ -0.1
COPS7B-221ENST00000488111 KIAA0100Q14667 2235 aaKnown RBP14.43□□□□□ -0.1
COPS7B-221ENST00000488111 TLDC2A0PJX2 215 aa14.43□□□□□ -0.1
COPS7B-221ENST00000488111 FAM187AA6NFU0 413 aa14.43□□□□□ -0.1
COPS7B-221ENST00000488111 ITGB3P05106 788 aa14.43□□□□□ -0.1
COPS7B-221ENST00000488111 GNAZP19086 355 aa14.43□□□□□ -0.1
COPS7B-221ENST00000488111 ANXA13P27216 316 aa14.43□□□□□ -0.1
COPS7B-221ENST00000488111 SKIV2L2P42285 1042 aaKnown RBP14.43□□□□□ -0.1
COPS7B-221ENST00000488111 JAM2P57087 298 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms