RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 KCNE1P15382 129 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 HSPA4P34932 840 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 TNFSF9P41273 254 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 GRM5P41594 1212 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 IFNAR2P48551 515 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 AARSP49588 968 aaKnown RBP eCLIP6.36□□□□□ -1.39
COL4A3-206ENST00000487633 CSNK1EP49674 416 aaKnown RBP6.36□□□□□ -1.39
COL4A3-206ENST00000487633 MRPS21P82921 87 aaKnown RBP6.36□□□□□ -1.39
COL4A3-206ENST00000487633 HDAC1Q13547 482 aaPredicted RBP6.36□□□□□ -1.39
COL4A3-206ENST00000487633 RTP5Q14D33 572 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 NECTIN1Q15223 517 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 TMEM132AQ24JP5 1023 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 KIF19Q2TAC6 998 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 LINC00303Q3SY05 128 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 C4orf17Q53FE4 359 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 ATF7IP2Q5U623 682 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 CREB3L3Q68CJ9 461 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 CC2D1AQ6P1N0 951 aaPredicted RBP6.36□□□□□ -1.39
COL4A3-206ENST00000487633 MON1AQ86VX9 555 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 TEX2Q8IWB9 1127 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 RASEFQ8IZ41 740 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 OXER1Q8TDS5 423 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 SH3RF2Q8TEC5 729 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 FGF11Q92914 225 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 WBP2Q969T9 261 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 NXPE2Q96DL1 559 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 MED8Q96G25 268 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 P2RY11Q96G91 374 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 TMEM176AQ96HP8 235 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 ZFRQ96KR1 1074 aaKnown RBP6.36□□□□□ -1.39
COL4A3-206ENST00000487633 PRIMPOLQ96LW4 560 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 YTHDC1Q96MU7 727 aaKnown RBP6.36□□□□□ -1.39
COL4A3-206ENST00000487633 HSD17B14Q9BPX1 270 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 EIF2AK1Q9BQI3 630 aaKnown RBP6.36□□□□□ -1.39
COL4A3-206ENST00000487633 MIR1-1HGQ9H1L0 117 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 ZSWIM4Q9H7M6 989 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 TRPC7Q9HCX4 862 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 GJB4Q9NTQ9 266 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 CNTN3Q9P232 1028 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 MAGED2Q9UNF1 606 aaPredicted RBP6.36□□□□□ -1.39
COL4A3-206ENST00000487633 PAXBP1Q9Y5B6 917 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 PCDHB1Q9Y5F3 818 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 SNX11Q9Y5W9 270 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 LRRK2Q5S007 2527 aa6.36□□□□□ -1.39
COL4A3-206ENST00000487633 ITPR3Q14573 2671 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 NBASA2RRP1 2371 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 H0Y8X5 98 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 TNFSF14O43557 240 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 HCRTO43612 131 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 MARCH6O60337 910 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 HAPLN1P10915 354 aaPredicted RBP6.35□□□□□ -1.39
COL4A3-206ENST00000487633 HARSP12081 509 aaKnown RBP6.35□□□□□ -1.39
COL4A3-206ENST00000487633 JUPP14923 745 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 ITGB6P18564 788 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 CR2P20023 1033 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 GNA11P29992 359 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 CDC25CP30307 473 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 MATKP42679 507 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 RHDQ02161 417 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 NUCB1Q02818 461 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 FAM160A1Q05DH4 1040 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 UBAP2LQ14157 1087 aaKnown RBP6.35□□□□□ -1.39
COL4A3-206ENST00000487633 SAFBQ15424 915 aaKnown RBP eCLIP6.35□□□□□ -1.39
COL4A3-206ENST00000487633 DDR2Q16832 855 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 C6orf132Q5T0Z8 1188 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 TTC22Q5TAA0 569 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 HES3Q5TGS1 186 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 EGFLAMQ63HQ2 1017 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 OVOS1Q6IE37 1185 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 FBXL19Q6PCT2 694 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 RHBDF2Q6PJF5 856 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 OTUD6AQ7L8S5 288 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 FILIP1Q7Z7B0 1213 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 GATAD2AQ86YP4 633 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 ADGRG2Q8IZP9 1017 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 NAT16Q8N8M0 369 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 APPL2Q8NEU8 664 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 DNASE2BQ8WZ79 361 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 WBP1Q96G27 269 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 PSMG3-AS1Q96PY0 264 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 NCOA5Q9HCD5 579 aaKnown RBP6.35□□□□□ -1.39
COL4A3-206ENST00000487633 ZBTB47Q9UFB7 747 aaPredicted RBP6.35□□□□□ -1.39
COL4A3-206ENST00000487633 EIF2B4Q9UI10 523 aaKnown RBP6.35□□□□□ -1.39
COL4A3-206ENST00000487633 MAFFQ9ULX9 164 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 PPME1Q9Y570 386 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 ASB3Q9Y575 518 aa6.35□□□□□ -1.39
COL4A3-206ENST00000487633 A0A0A0MRY4 1105 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 A0A1B0GTW7 788 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 PMS2P1A4D2B8 440 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 CLEC18AA5D8T8 446 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 FLRT2O43155 660 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 EFSO43281 561 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 LYPLA2O95372 231 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 ZNF883P0CG24 379 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 SPATA31C1P0DKV0 1188 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 HOXB2P14652 356 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 DPP6P42658 865 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 ATP2C1P98194 919 aaPredicted RBP6.34□□□□□ -1.39
COL4A3-206ENST00000487633 AMPD2Q01433 879 aa6.34□□□□□ -1.39
COL4A3-206ENST00000487633 SRSF6Q13247 344 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms