RNA–Protein interactions for RNA: ENST00000487563.1

PLOD3-215, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 2

Gene PLOD3, Length 712 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-215ENST00000487563 EP300Q09472 2414 aaPredicted RBP25.21■■□□□ 1.63
PLOD3-215ENST00000487563 TRAV19A0A0A6YYK7 116 aa25.2■■□□□ 1.62
PLOD3-215ENST00000487563 CMA1P23946 247 aa25.2■■□□□ 1.62
PLOD3-215ENST00000487563 GNL1P36915 607 aaPredicted RBP25.2■■□□□ 1.62
PLOD3-215ENST00000487563 PSMD2Q13200 908 aa25.2■■□□□ 1.62
PLOD3-215ENST00000487563 KMT5BQ4FZB7 885 aa25.2■■□□□ 1.62
PLOD3-215ENST00000487563 MDH1BQ5I0G3 518 aa25.2■■□□□ 1.62
PLOD3-215ENST00000487563 SPEM1Q8N4L4 309 aa25.2■■□□□ 1.62
PLOD3-215ENST00000487563 SYAP1Q96A49 352 aaPredicted RBP25.2■■□□□ 1.62
PLOD3-215ENST00000487563 NXF1Q9UBU9 619 aaKnown RBP25.2■■□□□ 1.62
PLOD3-215ENST00000487563 SMG5Q9UPR3 1016 aaKnown RBP25.2■■□□□ 1.62
PLOD3-215ENST00000487563 KLRC4O43908 158 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 LILRB5O75023 590 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 TACC1O75410 805 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 USP17L7P0C7H9 530 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 MYL6P60660 151 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 SATB1Q01826 763 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 STK4Q13043 487 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 RUNX3Q13761 415 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 ZNF268Q14587 947 aaPredicted RBP25.19■■□□□ 1.62
PLOD3-215ENST00000487563 TRIM68Q6AZZ1 485 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 Q6ZS52 159 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 KIAA0895Q8NCT3 520 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 MYCBPAPQ8TBZ2 947 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 SECISBP2LQ93073 1101 aaKnown RBP25.19■■□□□ 1.62
PLOD3-215ENST00000487563 PCED1BQ96HM7 432 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 FAM83CQ9BQN1 747 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 EBF3Q9H4W6 596 aa25.19■■□□□ 1.62
PLOD3-215ENST00000487563 KIF26AQ9ULI4 1882 aaPredicted RBP25.19■■□□□ 1.62
PLOD3-215ENST00000487563 TRIM66O15016 1216 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 ATICP31939 592 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 ID4P47928 161 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 CASP4P49662 377 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 FAM160A1Q05DH4 1040 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 GAS6Q14393 721 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 KCNB1Q14721 858 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 DCLK2Q8N568 766 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 ZNF516Q92618 1163 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 CCDC47Q96A33 483 aaKnown RBP25.18■■□□□ 1.62
PLOD3-215ENST00000487563 SPATA17Q96L03 361 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 EPC1Q9H2F5 836 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 EHD2Q9NZN4 543 aa25.18■■□□□ 1.62
PLOD3-215ENST00000487563 STAU1O95793 577 aaKnown RBP25.17■■□□□ 1.62
PLOD3-215ENST00000487563 MYL1P05976 194 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 FAM163BP0C2L3 166 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 AP3M2P53677 418 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 AMPD2Q01433 879 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 MTF1Q14872 753 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 PDGFRLQ15198 375 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 ZNF699Q32M78 642 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 DENND5BQ6ZUT9 1274 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 CEP295NLQ96MC4 621 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 GZF1Q9H116 711 aaPredicted RBP25.17■■□□□ 1.62
PLOD3-215ENST00000487563 HPS4Q9NQG7 708 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 RAB23Q9ULC3 237 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 GTF3C3Q9Y5Q9 886 aa25.17■■□□□ 1.62
PLOD3-215ENST00000487563 A8MXQ7 604 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 TDGF1P13385 188 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 ARSAP15289 507 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 PTPN1P18031 435 aaKnown RBP25.16■■□□□ 1.62
PLOD3-215ENST00000487563 SYKP43405 635 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 PDE6CP51160 858 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 OTOGLQ3ZCN5 2332 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 WDR44Q5JSH3 913 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 ARL14EPQ8N8R7 260 aaPredicted RBP25.16■■□□□ 1.62
PLOD3-215ENST00000487563 CHAMP1Q96JM3 812 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 CYP2S1Q96SQ9 504 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 TRPM5Q9NZQ8 1165 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 ATP6V1DQ9Y5K8 247 aa25.16■■□□□ 1.62
PLOD3-215ENST00000487563 SPTBN4Q9H254 2564 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 LRRIQ3A6PVS8 624 aaPredicted RBP25.15■■□□□ 1.62
PLOD3-215ENST00000487563 IFNAR2P48551 515 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 GRSF1Q12849 480 aaKnown RBP eCLIP25.15■■□□□ 1.62
PLOD3-215ENST00000487563 CCINQ13939 588 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 ZNF667Q5HYK9 610 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 TDRD10Q5VZ19 366 aaKnown RBP25.15■■□□□ 1.62
PLOD3-215ENST00000487563 SYNPOQ8N3V7 929 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 CPA6Q8N4T0 437 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 RIN3Q8TB24 985 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 PLEKHO2Q8TD55 490 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 PARD3BQ8TEW8 1205 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 SLC22A12Q96S37 553 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 ELOVL4Q9GZR5 314 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 XYLT2Q9H1B5 865 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 DPEP3Q9H4B8 488 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 HPSEQ9Y251 543 aa25.15■■□□□ 1.62
PLOD3-215ENST00000487563 C2orf78A6NCI8 922 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 F8VP50 259 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 PDXKO00764 312 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 KIF20AO95235 890 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 NR3C1P04150 777 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 RPN1P04843 607 aaKnown RBP25.14■■□□□ 1.62
PLOD3-215ENST00000487563 HDCP19113 662 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 USP4Q13107 963 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 NCOA4Q13772 614 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 ZNF77Q15935 545 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 SCARA5Q6ZMJ2 495 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 SLC9A9Q8IVB4 645 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 B3GALNT2Q8NCR0 500 aa25.14■■□□□ 1.62
PLOD3-215ENST00000487563 EXOC4Q96A65 974 aa25.14■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms