RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 CHD6Q8TD26 2715 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 GABRDO14764 452 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 TCF3P15923 654 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 NR1H3Q13133 447 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 KCNB1Q14721 858 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 L1TD1Q5T7N2 865 aaKnown RBP20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 PMS2CLQ68D20 193 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 ADGRF2Q8IZF7 708 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 CSGALNACT2Q8N6G5 542 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 TOP6BLQ8N6T0 577 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 FSIP1Q8NA03 581 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 SPATA18Q8TC71 538 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 USP33Q8TEY7 942 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 FUBP3Q96I24 572 aaKnown RBP eCLIP20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 EPSTI1Q96J88 318 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 ACCSQ96QU6 501 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 TBC1D7Q9P0N9 293 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 SEL1LQ9UBV2 794 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 SIX4Q9UIU6 781 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 RALYQ9UKM9 306 aaKnown RBP20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 ARHGAP26Q9UNA1 814 aa20.85■□□□□ 0.93
SMPDL3A-202ENST00000487215 ANTXRLA6NF34 631 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 CD2BP2O95400 341 aaKnown RBP20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 NFATC1O95644 943 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 CENPBP07199 599 aaPredicted RBP20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 KRT19P08727 400 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 PCSK1P29120 753 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 OPRD1P41143 372 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 LHX1P48742 406 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 SEC13P55735 322 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 C8orf34Q49A92 452 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 USP39Q53GS9 565 aaKnown RBP20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 DAB2IPQ5VWQ8 1189 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 C11orf74Q86VG3 221 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 RASSF3Q86WH2 238 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 CCDC26Q8TAB7 109 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 LAMA1P25391 3075 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 FRYQ5TBA9 3013 aa20.84■□□□□ 0.93
SMPDL3A-202ENST00000487215 GOLGA8IPA6NC78 632 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 MYMKA6NI61 221 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 GOLGA8JA6NMD2 632 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 C1QTNF9BB2RNN3 333 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 K7EQS6 105 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 GCNT3O95395 438 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 LDHAP00338 332 aaKnown RBP20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 C1QTNF9P0C862 333 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 HDCP19113 662 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 BCKDHBP21953 392 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 GARTP22102 1010 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 MAGEA11P43364 429 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 CASP5P51878 434 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 RBP5P82980 135 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 ZXDBP98169 803 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 ZNF252P-AS1Q0IIN9 211 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 SOWAHAQ2M3V2 549 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 C2orf27AQ580R0 203 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 ANO7Q6IWH7 933 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 FAM171BQ6P995 826 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 BRAPQ7Z569 592 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 DNAJC19Q96DA6 116 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 CNOT6LQ96LI5 555 aaKnown RBP20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 CBWD1Q9BRT8 395 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 MTMR12Q9C0I1 747 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 STK17AQ9UEE5 414 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 SMC3Q9UQE7 1217 aa20.83■□□□□ 0.93
SMPDL3A-202ENST00000487215 KHNYNO15037 678 aaKnown RBP20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 ATP2C2O75185 946 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 GAP43P17677 238 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 PSMC1P62191 440 aaKnown RBP20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 FOXC1Q12948 553 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 GAB4Q2WGN9 574 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 SH3PXD2AQ5TCZ1 1133 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 LARP1BQ659C4 914 aaKnown RBP20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 UNQ6494/PRO21346Q6UXR6 183 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 MDGA1Q8NFP4 955 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 MYLPFQ96A32 169 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 SYT15Q9BQS2 421 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 PDE11AQ9HCR9 933 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 TMEM9BQ9NQ34 198 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 MMP17Q9ULZ9 603 aa20.82■□□□□ 0.92
SMPDL3A-202ENST00000487215 CEP295Q9C0D2 2601 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 PATE3B3GLJ2 98 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 TMEM191BP0C7N4 346 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 PDE6CP51160 858 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 C4orf50Q6ZRC1 276 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 CYP2U1Q7Z449 544 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 SYCP3Q8IZU3 236 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 CCDC33Q8N5R6 958 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 NOC3LQ8WTT2 800 aaKnown RBP20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 KBTBD7Q8WVZ9 684 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 SPATA17Q96L03 361 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 FGFBP2Q9BYJ0 223 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 CRTAC1Q9NQ79 661 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 OLFML3Q9NRN5 406 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 MAGEC2Q9UBF1 373 aaPredicted RBP20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 CCDC39Q9UFE4 941 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 WASF3Q9UPY6 502 aa20.81■□□□□ 0.92
SMPDL3A-202ENST00000487215 ANAPC1Q9H1A4 1944 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 LEFTY2O00292 366 aa20.8■□□□□ 0.92
SMPDL3A-202ENST00000487215 CDX4O14627 284 aaPredicted RBP20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms