RNA–Protein interactions for RNA: ENST00000487193.1

ATPAF1-205, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 513 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-205ENST00000487193 SLC22A12Q96S37 553 aa13.23□□□□□ -0.29
ATPAF1-205ENST00000487193 CCDC94Q9BW85 323 aaPredicted RBP13.23□□□□□ -0.29
ATPAF1-205ENST00000487193 FTSJ1Q9UET6 329 aa13.23□□□□□ -0.29
ATPAF1-205ENST00000487193 MYO18AQ92614 2054 aaKnown RBP13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 A0A1B0GVT2 93 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 BTBD18B2RXH4 712 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 CR2P20023 1033 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 GRK6P43250 576 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 MYBPC2Q14324 1141 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 ZC2HC1CQ53FD0 456 aaPredicted RBP13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 NT5DC1Q5TFE4 455 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 HES3Q5TGS1 186 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 OVOS1Q6IE37 1185 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 DSTYKQ6XUX3 929 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 SH3RF2Q8TEC5 729 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 RUFY2Q8WXA3 655 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 TSC1Q92574 1164 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 SLC6A17Q9H1V8 727 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 C2orf40Q9H1Z8 148 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 VPS54Q9P1Q0 977 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 TMEM131Q92545 1883 aa13.22□□□□□ -0.29
ATPAF1-205ENST00000487193 NID2Q14112 1375 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 CREBBPQ92793 2442 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 ABCA12Q86UK0 2595 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 BCAT2O15382 392 aaPredicted RBP13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 CKMP06732 381 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 USP17L7P0C7H9 530 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 HOXB2P14652 356 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 KCNE1P15382 129 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 HMGA1P17096 107 aaKnown RBP13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 NDUFV2P19404 249 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 TNFSF9P41273 254 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 GRM5P41594 1212 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 TNFRSF4P43489 277 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 RIPPLY3P57055 190 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 NLRP5P59047 1200 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 VAC14Q08AM6 782 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 USP4Q13107 963 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 PIGOQ8TEQ8 1089 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 LRRC15Q8TF66 581 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 BSNDQ8WZ55 320 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 DNASE2BQ8WZ79 361 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 ZFRQ96KR1 1074 aaKnown RBP13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 TCEANC2Q96MN5 208 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 CCDC113Q9H0I3 377 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 ARHGEF4Q9NR80 690 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 ANKEF1Q9NU02 776 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 HSPBP1Q9NZL4 362 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 SEPT3Q9UH03 358 aa13.21□□□□□ -0.29
ATPAF1-205ENST00000487193 KLF18A0A0U1RQI7 1052 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 CBX4O00257 560 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 AFPP02771 609 aaKnown RBP13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 CSNK1EP49674 416 aaKnown RBP13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 IL9RQ01113 521 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 APBB1IPQ7Z5R6 666 aaPredicted RBP13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 C12orf40Q86WS4 652 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 ARL14EPQ8N8R7 260 aaPredicted RBP13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 CCDC148Q8NFR7 591 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 DEPTORQ8TB45 409 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 FAM20AQ96MK3 541 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 NACC1Q96RE7 527 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 HSFX1Q9UBD0 423 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 TUBGCP4Q9UGJ1 667 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 SNX11Q9Y5W9 270 aa13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 UTP20O75691 2785 aaKnown RBP13.2□□□□□ -0.3
ATPAF1-205ENST00000487193 MYOFQ9NZM1 2061 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 CABIN1Q9Y6J0 2220 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 TRAV19A0A0A6YYK7 116 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 TBC1D3BA6NDS4 549 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 KLK10O43240 276 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 PRPF3O43395 683 aaKnown RBP13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 CYP17A1P05093 508 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 NCAM1P13591 858 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 ATP2B1P20020 1258 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 GRIA2P42262 883 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 RARRES1P49788 294 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 PCBP4P57723 403 aaKnown RBP13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 AKAP17AQ02040 695 aaKnown RBP13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 RESTQ13127 1097 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 DCAF12L1Q5VU92 463 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 SDHAF4Q5VUM1 108 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 EXD3Q8N9H8 876 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 OXER1Q8TDS5 423 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 EIF2AK1Q9BQI3 630 aaKnown RBP13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 KIFC3Q9BVG8 833 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 GPR174Q9BXC1 333 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 KCNMB3Q9NPA1 279 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 CNTN3Q9P232 1028 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 EIF2B4Q9UI10 523 aaKnown RBP13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 NOTCH2Q04721 2471 aa13.19□□□□□ -0.3
ATPAF1-205ENST00000487193 AHCTF1Q8WYP5 2266 aa13.18□□□□□ -0.3
ATPAF1-205ENST00000487193 A0A0A0MRY4 1105 aa13.18□□□□□ -0.3
ATPAF1-205ENST00000487193 A0A1W2PQF6 199 aa13.18□□□□□ -0.3
ATPAF1-205ENST00000487193 ANO9A1A5B4 782 aa13.18□□□□□ -0.3
ATPAF1-205ENST00000487193 ENC1O14682 589 aa13.18□□□□□ -0.3
ATPAF1-205ENST00000487193 SCAMP3O14828 347 aaKnown RBP13.18□□□□□ -0.3
ATPAF1-205ENST00000487193 RFPL3O75679 317 aa13.18□□□□□ -0.3
ATPAF1-205ENST00000487193 HAPLN1P10915 354 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms