RNA–Protein interactions for RNA: ENST00000487150.2

LIMS3-205, Transcript of LIM zinc finger domain containing 3, humanhuman

TSL 3 BASIC

Gene LIMS3, Length 782 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-205ENST00000487150 LAMP2P13473 410 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 PFKLP17858 780 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 SP100P23497 879 aaPredicted RBP15.53■□□□□ 0.08
LIMS3-205ENST00000487150 NTHL1P78549 312 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 DDR2Q16832 855 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 ZSCAN23Q3MJ62 389 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 MIIPQ5JXC2 388 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 FUKQ8N0W3 1084 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 PDZD8Q8NEN9 1154 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 SLC2A14Q8TDB8 520 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 GIPC2Q8TF65 315 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 MRPS31Q92665 395 aaKnown RBP15.53■□□□□ 0.08
LIMS3-205ENST00000487150 E2F7Q96AV8 911 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 ELMO3Q96BJ8 720 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 CYFIP2Q96F07 1278 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 NECAB3Q96P71 396 aaPredicted RBP15.53■□□□□ 0.08
LIMS3-205ENST00000487150 SLITRK6Q9H5Y7 841 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 FAM49BQ9NUQ9 324 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 HESX1Q9UBX0 185 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 NME7Q9Y5B8 376 aa15.53■□□□□ 0.08
LIMS3-205ENST00000487150 VCANP13611 3396 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 SLC38A8A6NNN8 435 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 F8VP50 259 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 CCDC130P13994 396 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 ZNF18P17022 549 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 GABRR2P28476 465 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 RAD23BP54727 409 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 MTMR3Q13615 1198 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 KRT31Q15323 416 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 SLC5A9Q2M3M2 681 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 ZNF394Q53GI3 561 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 SGO2Q562F6 1265 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 HSP90AA4PQ58FG1 418 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 ARHGAP17Q68EM7 881 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 TMEM270Q6UE05 265 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 RNF135Q8IUD6 432 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 UBALD2Q8IYN6 164 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 ITFG1Q8TB96 612 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 WHAMMQ8TF30 809 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 OVCA2Q8WZ82 227 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 SLITRK1Q96PX8 696 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 MYADMQ96S97 322 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 CRACR2AQ9BSW2 395 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 FUCA2Q9BTY2 467 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 TTLL2Q9BWV7 592 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 ATXN3LQ9H3M9 355 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 FBXO44Q9H4M3 255 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 CSNK1G1Q9HCP0 422 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 LIMA1Q9UHB6 759 aaKnown RBP15.52■□□□□ 0.08
LIMS3-205ENST00000487150 SORCS3Q9UPU3 1222 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 PCDHB4Q9Y5E5 795 aa15.52■□□□□ 0.08
LIMS3-205ENST00000487150 A0A1W2PRU2 124 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 LGALS16A8MUM7 142 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 DCXO43602 365 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 LRRN2O75325 713 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 VDRP11473 427 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 CD19P15391 556 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 HMGA1P17096 107 aaKnown RBP15.51■□□□□ 0.07
LIMS3-205ENST00000487150 NPR3P17342 541 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 CEBPBP17676 345 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 PON1P27169 355 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 BCAT1P54687 386 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 NFKBIBQ15653 356 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 PTPN21Q16825 1174 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 CCDC142Q17RM4 750 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 FILIP1LQ4L180 1135 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 NUP93Q8N1F7 819 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 UBR7Q8N806 425 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 SLC4A11Q8NBS3 891 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 SHKBP1Q8TBC3 707 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 TWNKQ96RR1 684 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 LRRC3Q9BY71 257 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 UBE2TQ9NPD8 197 aaPredicted RBP15.51■□□□□ 0.07
LIMS3-205ENST00000487150 TAB2Q9NYJ8 693 aa15.51■□□□□ 0.07
LIMS3-205ENST00000487150 MAGED2Q9UNF1 606 aaPredicted RBP15.51■□□□□ 0.07
LIMS3-205ENST00000487150 MTCL1Q9Y4B5 1905 aaKnown RBP15.51■□□□□ 0.07
LIMS3-205ENST00000487150 NCANO14594 1321 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 LRRC10BA6NIK2 292 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 ANHXE9PGG2 379 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 GOLGA6L19H0YKK7 550 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 CLDN5O00501 218 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 MED7O43513 233 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 ECI2O75521 394 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 SETSIPP0DME0 302 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 KRT5P13647 590 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 ADORA2BP29275 332 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 WEE1P30291 646 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 GPR15P49685 360 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 ORC1Q13415 861 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 NCAPHQ15003 741 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 MEA1Q16626 185 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 PHLDB3Q6NSJ2 640 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 RRAGAQ7L523 313 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 FMNL3Q8IVF7 1028 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 ARHGEF19Q8IW93 802 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 HS6ST3Q8IZP7 471 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 C12orf29Q8N999 325 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 RBBP8NLQ8NC74 664 aaPredicted RBP15.5■□□□□ 0.07
LIMS3-205ENST00000487150 STKLD1Q8NE28 680 aa15.5■□□□□ 0.07
LIMS3-205ENST00000487150 ING5Q8WYH8 240 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 132.4 ms