RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ATP2C2O75185 946 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 POU2F2P09086 479 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 HNRNPA1P09651 372 aaKnown RBP eCLIP13.78□□□□□ -0.2
SSR4-211ENST00000486204 CCDC192P0DO97 292 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 CDH8P55286 799 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 SPEM2Q0P670 501 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 KCNH2Q12809 1159 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 UVSSAQ2YD98 709 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 SLC39A12Q504Y0 691 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 PPM1LQ5SGD2 360 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 FAM171BQ6P995 826 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 RTL10Q7L3V2 364 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 ATAD1Q8NBU5 361 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 LMO3Q8TAP4 145 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 ENOX1Q8TC92 643 aaKnown RBP13.78□□□□□ -0.2
SSR4-211ENST00000486204 SYT15Q9BQS2 421 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 NIF3L1Q9GZT8 377 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 CYP4F11Q9HBI6 524 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 CRTAC1Q9NQ79 661 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.78□□□□□ -0.21e-7■■■■■ 115.4
SSR4-211ENST00000486204 ANO10Q9NW15 660 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 HSFX1Q9UBD0 423 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 MAFFQ9ULX9 164 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 YIPF1Q9Y548 306 aa13.78□□□□□ -0.2
SSR4-211ENST00000486204 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.78□□□□□ -0.2
SSR4-211ENST00000486204 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.77□□□□□ -0.21
SSR4-211ENST00000486204 MYBPHLA2RUH7 354 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 ANHXE9PGG2 379 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 PRRG1O14668 218 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 LAMP2P13473 410 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 PCSK1P29120 753 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 CDR1P51861 262 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 PSMC1P62191 440 aaKnown RBP13.77□□□□□ -0.21
SSR4-211ENST00000486204 TSPY1Q01534 308 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 INCA1Q0VD86 236 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 DUSP4Q13115 394 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 UBXN2BQ14CS0 331 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 CDKAL1Q5VV42 579 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 DCP1BQ8IZD4 617 aaKnown RBP13.77□□□□□ -0.21
SSR4-211ENST00000486204 ST13P5Q8NFI4 369 aaPredicted RBP13.77□□□□□ -0.21
SSR4-211ENST00000486204 C2orf15Q8WU43 125 aaKnown RBP13.77□□□□□ -0.21
SSR4-211ENST00000486204 SMG7Q92540 1137 aaKnown RBP13.77□□□□□ -0.21
SSR4-211ENST00000486204 NELL1Q92832 810 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 IMPG2Q9BZV3 1241 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 DNAJC25Q9H1X3 360 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 DPEP3Q9H4B8 488 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 SAMSN1Q9NSI8 373 aaKnown RBP13.77□□□□□ -0.21
SSR4-211ENST00000486204 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSR4-211ENST00000486204 HMGXB4Q9UGU5 601 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 GTF3C4Q9UKN8 822 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 CDH9Q9ULB4 789 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 MTF2Q9Y483 593 aaPredicted RBP13.77□□□□□ -0.21
SSR4-211ENST00000486204 NFE2L3Q9Y4A8 694 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.77□□□□□ -0.21
SSR4-211ENST00000486204 NUMBLQ9Y6R0 609 aa13.77□□□□□ -0.21
SSR4-211ENST00000486204 ATRXP46100 2492 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 FAM170BA6NMN3 283 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 P4HA2O15460 535 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 CCL16O15467 120 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 SOAT2O75908 522 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 AFPP02771 609 aaKnown RBP13.76□□□□□ -0.21
SSR4-211ENST00000486204 ATF6P18850 670 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 KCNA4P22459 653 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 ELF1P32519 619 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 GNL1P36915 607 aaPredicted RBP13.76□□□□□ -0.21
SSR4-211ENST00000486204 MAGEA9P43362 315 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 GPC5P78333 572 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 SMARCB1Q12824 385 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 HTR4Q13639 388 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 NCAPHQ15003 741 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 HSP90AA4PQ58FG1 418 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 TSSK4Q6SA08 328 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 OR6B3Q8NGW1 331 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 SPPL2BQ8TCT7 592 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 TATDN2Q93075 761 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 COL26A1Q96A83 441 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 FAXDC2Q96IV6 333 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 TWNKQ96RR1 684 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 ARID3AQ99856 593 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 LPIN3Q9BQK8 851 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 DDX23Q9BUQ8 820 aaKnown RBP13.76□□□□□ -0.21
SSR4-211ENST00000486204 OSBPL6Q9BZF3 934 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 HSD3B7Q9H2F3 369 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 SNX25Q9H3E2 840 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 HCFC1R1Q9NWW0 138 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 CEP72Q9P209 647 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 SLC27A5Q9Y2P5 690 aa13.76□□□□□ -0.21
SSR4-211ENST00000486204 A8MXQ7 604 aa13.75□□□□□ -0.21
SSR4-211ENST00000486204 CLSTN1O94985 981 aa13.75□□□□□ -0.21
SSR4-211ENST00000486204 PDGFRBP09619 1106 aa13.75□□□□□ -0.21
SSR4-211ENST00000486204 HAPLN1P10915 354 aaPredicted RBP13.75□□□□□ -0.21
SSR4-211ENST00000486204 P4HA1P13674 534 aa13.75□□□□□ -0.21
SSR4-211ENST00000486204 NTHL1P78549 312 aa13.75□□□□□ -0.21
SSR4-211ENST00000486204 PRKCQQ04759 706 aa13.75□□□□□ -0.21
SSR4-211ENST00000486204 TWF1Q12792 350 aa13.75□□□□□ -0.21
SSR4-211ENST00000486204 NFE2Q16621 373 aaPredicted RBP13.75□□□□□ -0.21
SSR4-211ENST00000486204 TPD52L1Q16890 204 aaPredicted RBP13.75□□□□□ -0.21
SSR4-211ENST00000486204 CFAP221Q4G0U5 840 aa13.75□□□□□ -0.21
SSR4-211ENST00000486204 MIIPQ5JXC2 388 aa13.75□□□□□ -0.21
SSR4-211ENST00000486204 GET4Q7L5D6 327 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms