RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TBX10O75333 385 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 AP1G2O75843 785 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 NOL4O94818 638 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 CCDC172P0C7W6 258 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 PDE6CP51160 858 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 ITIH3Q06033 890 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 CLUL1Q15846 466 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 PPP1R26Q5T8A7 1209 aaPredicted RBP12.08□□□□□ -0.48
NUP50-216ENST00000486184 TMC5Q6UXY8 1006 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 ITIH5Q86UX2 942 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 TTC9BQ8N6N2 239 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 C12orf76Q8N812 135 aaPredicted RBP12.08□□□□□ -0.48
NUP50-216ENST00000486184 ZNF397Q8NF99 534 aaPredicted RBP12.08□□□□□ -0.48
NUP50-216ENST00000486184 SMG7Q92540 1137 aaKnown RBP12.08□□□□□ -0.48
NUP50-216ENST00000486184 ZNF512Q96ME7 567 aaPredicted RBP12.08□□□□□ -0.48
NUP50-216ENST00000486184 HNRNPABQ99729 332 aaKnown RBP12.08□□□□□ -0.48
NUP50-216ENST00000486184 NAA15Q9BXJ9 866 aaKnown RBP12.08□□□□□ -0.48
NUP50-216ENST00000486184 RHOBTB2Q9BYZ6 727 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 ZNF518BQ9C0D4 1074 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 PDCL3Q9H2J4 239 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 DMAP1Q9NPF5 467 aaPredicted RBP12.08□□□□□ -0.48
NUP50-216ENST00000486184 CNTN6Q9UQ52 1028 aa12.08□□□□□ -0.48
NUP50-216ENST00000486184 H3BQ06 376 aaPredicted RBP12.07□□□□□ -0.48
NUP50-216ENST00000486184 EPHB6O15197 1021 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 CYP26A1O43174 497 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 OBSL1O75147 1896 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 RFPL2O75678 378 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 SOAT2O75908 522 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 VNN2O95498 520 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 PNMA6AP0CW24 399 aaPredicted RBP12.07□□□□□ -0.48
NUP50-216ENST00000486184 BRD2P25440 801 aaKnown RBP12.07□□□□□ -0.48
NUP50-216ENST00000486184 SOX5P35711 763 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 ZNF132P52740 706 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 TRIM14Q14142 442 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 COL19A1Q14993 1142 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 GOLGA7BQ2TAP0 167 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 ARHGAP17Q68EM7 881 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 SPECC1LQ69YQ0 1117 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 DPY19L2P1Q6NXN4 242 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 CYP26C1Q6V0L0 522 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 FUKQ8N0W3 1084 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 CMASQ8NFW8 434 aaPredicted RBP12.07□□□□□ -0.48
NUP50-216ENST00000486184 RIPOR3Q96MK2 946 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 PRKD2Q9BZL6 878 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 EDEM3Q9BZQ6 932 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 CRISPLD1Q9H336 500 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 EHD2Q9NZN4 543 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 CLEC1BQ9P126 229 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 ASB3Q9Y575 518 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 ITIH6Q6UXX5 1313 aa12.07□□□□□ -0.48
NUP50-216ENST00000486184 DENND4AQ7Z401 1863 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 DENND4CQ5VZ89 1909 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.06□□□□□ -0.48
NUP50-216ENST00000486184 GOLGA6L3A6NEY3 463 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 F8VP50 259 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 M0QYV0 167 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 RNF225M0QZC1 329 aaPredicted RBP12.06□□□□□ -0.48
NUP50-216ENST00000486184 GFPT2O94808 682 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 CSH1P0DML2 217 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 CSH2P0DML3 217 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 NPR3P17342 541 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 PTPN2P17706 415 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 KRT9P35527 623 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 LTBRP36941 435 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 PBX1P40424 430 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 MTHFRP42898 656 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 BCAT1P54687 386 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 MAP3K7CLP57077 242 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 JAM2P57087 298 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 ARID5AQ03989 594 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 DLX2Q07687 328 aaPredicted RBP12.06□□□□□ -0.48
NUP50-216ENST00000486184 DDR2Q16832 855 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 AAK1Q2M2I8 961 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 FIGNQ5HY92 759 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 ATAT1Q5SQI0 421 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 SYCE2Q6PIF2 218 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 FAM71AQ8IYT1 594 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 GIPC2Q8TF65 315 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 CPLX3Q8WVH0 158 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 RNF25Q96BH1 459 aaPredicted RBP12.06□□□□□ -0.48
NUP50-216ENST00000486184 C8orf48Q96LL4 319 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 CEP295NLQ96MC4 621 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 NUCKS1Q9H1E3 243 aaKnown RBP12.06□□□□□ -0.48
NUP50-216ENST00000486184 ADAM7Q9H2U9 754 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 ASAH2Q9NR71 780 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 THEGQ9P2T0 379 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 TSPAN16Q9UKR8 245 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 MYO6Q9UM54 1294 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 FAM50BQ9Y247 325 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 CEP83Q9Y592 693 aa12.06□□□□□ -0.48
NUP50-216ENST00000486184 A0A1W2PQJ5 194 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 LRRC53A6NM62 1247 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 O00370 1275 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 POU2F2P09086 479 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 FERP16591 822 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 ATF6P18850 670 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 GPR15P49685 360 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 ZNF75DP51815 510 aa12.05□□□□□ -0.48
NUP50-216ENST00000486184 BST2Q10589 180 aaKnown RBP12.05□□□□□ -0.48
NUP50-216ENST00000486184 IFRD2Q12894 506 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms