RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 RBM43Q6ZSC3 357 aaKnown RBP6.14□□□□□ -1.43
CUX1-208ENST00000485792 CCDC149Q6ZUS6 474 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 CEP57Q86XR8 500 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 TMEM86AQ8N2M4 240 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 PDCL2Q8N4E4 241 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 TOP6BLQ8N6T0 577 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 SLC7A14Q8TBB6 771 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 C2orf15Q8WU43 125 aaKnown RBP6.14□□□□□ -1.43
CUX1-208ENST00000485792 EDAQ92838 391 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ZNF560Q96MR9 790 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 LRRC3BQ96PB8 259 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 PGLYRP2Q96PD5 576 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ARID3AQ99856 593 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ACBD6Q9BR61 282 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 MRPL45Q9BRJ2 306 aaKnown RBP6.14□□□□□ -1.43
CUX1-208ENST00000485792 KLF16Q9BXK1 252 aaPredicted RBP6.14□□□□□ -1.43
CUX1-208ENST00000485792 SMYD3Q9H7B4 428 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 CRTAC1Q9NQ79 661 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 LMBRD1Q9NUN5 540 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.14□□□□□ -1.43
CUX1-208ENST00000485792 DNMT3BQ9UBC3 853 aaKnown RBP6.14□□□□□ -1.43
CUX1-208ENST00000485792 AGAP1Q9UPQ3 857 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 NR2E1Q9Y466 385 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 YIPF1Q9Y548 306 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 NUB1Q9Y5A7 615 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ZFP37Q9Y6Q3 630 aaPredicted RBP6.14□□□□□ -1.43
CUX1-208ENST00000485792 CLUHO75153 1309 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 ZNF292O60281 2723 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 PIEZO1Q92508 2521 aa6.14□□□□□ -1.43
CUX1-208ENST00000485792 SOBPA7XYQ1 873 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 CCL16O15467 120 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ASS1P00966 412 aaKnown RBP6.13□□□□□ -1.43
CUX1-208ENST00000485792 CALCAP01258 141 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 LAMP2P13473 410 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ALADP13716 330 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 HMGA1P17096 107 aaKnown RBP6.13□□□□□ -1.43
CUX1-208ENST00000485792 CEBPBP17676 345 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 WARSP23381 471 aaKnown RBP6.13□□□□□ -1.43
CUX1-208ENST00000485792 LMO2P25791 158 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 GTF2H1P32780 548 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 MAGEA11P43364 429 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ASPAP45381 313 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 MYL6P60660 151 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ZXDBP98169 803 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 TFAMQ00059 246 aaKnown RBP6.13□□□□□ -1.43
CUX1-208ENST00000485792 APBA1Q02410 837 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ORC1Q13415 861 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ADAM9Q13443 819 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 MTMR3Q13615 1198 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 CFAP221Q4G0U5 840 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 CBWD6Q4V339 395 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 CBWD3Q5JTY5 395 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 CBWD5Q5RIA9 395 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 SDHAF4Q5VUM1 108 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 CWF19L1Q69YN2 538 aaKnown RBP6.13□□□□□ -1.43
CUX1-208ENST00000485792 ANKRD40Q6AI12 368 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ELMSAN1Q6PJG2 1045 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 EP400NLQ6ZTU2 488 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 PAQR9Q6ZVX9 377 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 SV2AQ7L0J3 742 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 OTOP3Q7RTS5 596 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 IRF2BP1Q8IU81 584 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 NPAS3Q8IXF0 933 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 CSGALNACT2Q8N6G5 542 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 UBR7Q8N806 425 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 TRIML1Q8N9V2 468 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ATAD1Q8NBU5 361 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ZMIZ2Q8NF64 920 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 SPPL2BQ8TCT7 592 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 WHAMMQ8TF30 809 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 SMG7Q92540 1137 aaKnown RBP6.13□□□□□ -1.43
CUX1-208ENST00000485792 FGF14Q92915 247 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 NXPE3Q969Y0 559 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 DHTKD1Q96HY7 919 aaPredicted RBP6.13□□□□□ -1.43
CUX1-208ENST00000485792 HPDLQ96IR7 371 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ANKRD36BP1Q96IX9 119 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 CEP295NLQ96MC4 621 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ZSWIM3Q96MP5 696 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ZSWIM1Q9BR11 485 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 PI4K2AQ9BTU6 479 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 BCO2Q9BYV7 579 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 PLA2G2FQ9BZM2 168 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 HSD3B7Q9H2F3 369 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 FAM124BQ9H5Z6 455 aaPredicted RBP6.13□□□□□ -1.43
CUX1-208ENST00000485792 TRPV4Q9HBA0 871 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ABCB6Q9NP58 842 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.13□□□□□ -1.43
CUX1-208ENST00000485792 TMPRSS4Q9NRS4 437 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 RMND1Q9NWS8 449 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 PGPEP1Q9NXJ5 209 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 ASB3Q9Y575 518 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 INSL5Q9Y5Q6 135 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 LAMA1P25391 3075 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 DCHS1Q96JQ0 3298 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 NYNRINQ9P2P1 1898 aaKnown RBP6.13□□□□□ -1.43
CUX1-208ENST00000485792 NUP205Q92621 2012 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 PI4KAP42356 2102 aa6.13□□□□□ -1.43
CUX1-208ENST00000485792 RIF1Q5UIP0 2472 aaKnown RBP6.13□□□□□ -1.43
CUX1-208ENST00000485792 CFAP54Q96N23 3096 aa6.12□□□□□ -1.43
CUX1-208ENST00000485792 MYBPHLA2RUH7 354 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms