RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, human

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-222	ENST00000485567	MYO1E	Q12965	1108 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	CNGB1	Q14028	1251 aa	Predicted RBP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	ZIK1	Q3SY52	487 aa	Predicted RBP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	PDCD4	Q53EL6	469 aa	Known RBP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	HS1BP3	Q53T59	392 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	TMTC4	Q5T4D3	741 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	MANEAL	Q5VSG8	457 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	TMEM108	Q6UXF1	575 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567		Q6ZRM9	215 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	GDF7	Q7Z4P5	450 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	GATAD2A	Q86YP4	633 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	MAPKAPK5	Q8IW41	473 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	CCDC28A	Q8IWP9	274 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	ZNF808	Q8N4W9	903 aa	Predicted RBP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	PAF1	Q8N7H5	531 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	STT3B	Q8TCJ2	826 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	OTUD7A	Q8TE49	926 aa	Predicted RBP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	RSC1A1	Q92681	617 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	PPP2R3C	Q969Q6	453 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	ZDHHC12	Q96GR4	267 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	BOD1	Q96IK1	185 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	TEPSIN	Q96N21	525 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	OSBPL9	Q96SU4	736 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	RBM15	Q96T37	977 aa	Known RBP eCLIP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	SORBS1	Q9BX66	1292 aa	Known RBP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	SMOC2	Q9H3U7	446 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	AS3MT	Q9HBK9	375 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	TMOD4	Q9NZQ9	345 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	EIF2B4	Q9UI10	523 aa	Known RBP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	KCNE5	Q9UJ90	142 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	NDRG4	Q9ULP0	352 aa	Known RBP	4.78	□□□□□ -1.64
FN1-222	ENST00000485567	FPGT-TNNI3K	V9GXZ4	949 aa		4.78	□□□□□ -1.64
FN1-222	ENST00000485567	GAGE12B	A1L429	117 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	GAGE12H	A6NDE8	117 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	MYADML2	A6NDP7	307 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	OTOL1	A6NHN0	477 aa	Predicted RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	GRXCR1	A8MXD5	290 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	TRIM38	O00635	465 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	IRAK2	O43187	625 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	ERN1	O75460	977 aa	Known RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	NTSR2	O95665	410 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	CFI	P05156	583 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	ELANE	P08246	267 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	ITGA2B	P08514	1039 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	ZSCAN22	P10073	491 aa	Predicted RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	CHRM3	P20309	590 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	HIBADH	P31937	336 aa	Known RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	RPS7	P62081	194 aa	Known RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	HSD11B2	P80365	405 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	OCA2	Q04671	838 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	E2F2	Q14209	437 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	KRTAP19-4	Q3LI73	84 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	ARHGAP15	Q53QZ3	475 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	XP32	Q5T750	250 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	CACHD1	Q5VU97	1274 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	ARMC6	Q6NXE6	501 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	JMJD6	Q6NYC1	403 aa	Predicted RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	MMS22L	Q6ZRQ5	1243 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	LRRC55	Q6ZSA7	311 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	MICALCL	Q6ZW33	695 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	KCTD20	Q7Z5Y7	419 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	TMEM132C	Q8N3T6	1108 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	PRPF18	Q99633	342 aa	Known RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	ZSWIM1	Q9BR11	485 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	ZCWPW1	Q9H0M4	648 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	TP63	Q9H3D4	680 aa	Predicted RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	ITM2C	Q9NQX7	267 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	HELLS	Q9NRZ9	838 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	TMEM74B	Q9NUR3	256 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	GJD2	Q9UKL4	321 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	JAG2	Q9Y219	1238 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	LZTS1	Q9Y250	596 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	HPSE	Q9Y251	543 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	LRRFIP2	Q9Y608	721 aa	Known RBP	4.77	□□□□□ -1.65
FN1-222	ENST00000485567	AATK	Q6ZMQ8	1374 aa		4.77	□□□□□ -1.65
FN1-222	ENST00000485567	AHRR	A9YTQ3	701 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	IPO5	O00410	1097 aa	Known RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	TOR1B	O14657	336 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	CD3EAP	O15446	510 aa	Known RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	TRIAP1	O43715	76 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	PRICKLE3	O43900	615 aa	Predicted RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	CCNT2	O60583	730 aa	Known RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	RPS6KA4	O75676	772 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	RASAL1	O95294	804 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	ITGB3	P05106	788 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	PECAM1	P16284	738 aa	Predicted RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	NDUFV1	P49821	464 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	FPGS	Q05932	587 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	ATP1A4	Q13733	1029 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	KCNAB1	Q14722	419 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	B3GNTL1	Q67FW5	361 aa	Predicted RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	SP5	Q6BEB4	398 aa	Predicted RBP	4.76	□□□□□ -1.65
FN1-222	ENST00000485567	LVRN	Q6Q4G3	990 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	SPART	Q8N0X7	666 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	FAM109A	Q8N4B1	249 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	TEX19	Q8NA77	164 aa		4.76	□□□□□ -1.65
FN1-222	ENST00000485567	IL17RE	Q8NFR9	667 aa		4.76	□□□□□ -1.65

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