RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 hCG_1984214I3L0E3 225 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 DCLK1O15075 740 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 TUBB4AP04350 444 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 ALDH2P05091 517 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 PRKCBP05771 671 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 PRKAR1BP31321 381 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 TFF2Q03403 129 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 HNRNPA0Q13151 305 aaKnown RBP5.18□□□□□ -1.58
SMC4-215ENST00000484799 ATAT1Q5SQI0 421 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 SLC18B1Q6NT16 456 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 MTHFD1LQ6UB35 978 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 TRIM72Q6ZMU5 477 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 DNAJC5GQ8N7S2 189 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 OR6B3Q8NGW1 331 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 ASB2Q96Q27 587 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 STAP2Q9UGK3 403 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 PNMA8BQ9ULN7 279 aaPredicted RBP5.18□□□□□ -1.58
SMC4-215ENST00000484799 TBC1D30Q9Y2I9 924 aa5.18□□□□□ -1.58
SMC4-215ENST00000484799 MRPS17Q9Y2R5 130 aaKnown RBP5.18□□□□□ -1.58
SMC4-215ENST00000484799 ARHGEF17Q96PE2 2063 aaPredicted RBP5.17□□□□□ -1.58
SMC4-215ENST00000484799 ALDH1L1O75891 902 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 PROSER3Q2NL68 480 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 PXDC1Q5TGL8 231 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 ZNF425Q6IV72 752 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 NEK8Q86SG6 692 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 RAB11FIP4Q86YS3 637 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 DENND1CQ8IV53 801 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 SPARTQ8N0X7 666 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 PRSS3P2Q8NHM4 247 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 PPP2R3CQ969Q6 453 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 FCRL4Q96PJ5 515 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 SH2D3AQ9BRG2 576 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 NMRK2Q9NPI5 230 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 SERGEFQ9UGK8 458 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 SSX2IPQ9Y2D8 614 aa5.17□□□□□ -1.58
SMC4-215ENST00000484799 A0A088AWK7 358 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 WIPF3A6NGB9 483 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 HTR1BP28222 390 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 SLC11A2P49281 568 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 CYP4F2P78329 520 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 SP2Q02086 613 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 Q6ZWC4 215 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 SIRT6Q8N6T7 355 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 CYP2W1Q8TAV3 490 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 JPH3Q8WXH2 748 aaPredicted RBP5.16□□□□□ -1.58
SMC4-215ENST00000484799 CCDC17Q96LX7 622 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 C1QTNF7Q9BXJ2 289 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 QTRT1Q9BXR0 403 aaKnown RBP5.16□□□□□ -1.58
SMC4-215ENST00000484799 MS4A7Q9GZW8 240 aaPredicted RBP5.16□□□□□ -1.58
SMC4-215ENST00000484799 WDR26Q9H7D7 661 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 ZNF521Q96K83 1311 aa5.16□□□□□ -1.58
SMC4-215ENST00000484799 KCNU1A8MYU2 1149 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 BTN3A1O00481 513 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 RGS10O43665 173 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 GCATO75600 419 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 WNT3P56703 355 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 SUMO2P61956 95 aaKnown RBP5.15□□□□□ -1.59
SMC4-215ENST00000484799 MYO1EQ12965 1108 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 RAB32Q13637 225 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 ZNF267Q14586 743 aaPredicted RBP5.15□□□□□ -1.59
SMC4-215ENST00000484799 CEP78Q5JTW2 689 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 MORN5Q5VZ52 161 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 DENND2CQ68D51 928 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 CAND1Q86VP6 1230 aaKnown RBP5.15□□□□□ -1.59
SMC4-215ENST00000484799 IZUMO1Q8IYV9 350 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 TERB1Q8NA31 727 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 DIS3LQ8TF46 1054 aaKnown RBP5.15□□□□□ -1.59
SMC4-215ENST00000484799 C5orf34Q96MH7 638 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 P2RX7Q99572 595 aaKnown RBP5.15□□□□□ -1.59
SMC4-215ENST00000484799 FSD1LQ9BXM9 530 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 USP22Q9UPT9 525 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 MED16Q9Y2X0 877 aa5.15□□□□□ -1.59
SMC4-215ENST00000484799 COL3A1P02461 1466 aaPredicted RBP5.14□□□□□ -1.59
SMC4-215ENST00000484799 POC1B-GALNT4F8VUJ3 575 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 AP4M1O00189 453 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 CES2O00748 559 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 PDE8BO95263 885 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 U2AF1L5P0DN76 240 aaPredicted RBP5.14□□□□□ -1.59
SMC4-215ENST00000484799 KITP10721 976 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 MTHFSP49914 203 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 DGKEP52429 567 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 RAB1AP62820 205 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 U2AF1Q01081 240 aaKnown RBP eCLIP5.14□□□□□ -1.59
SMC4-215ENST00000484799 PLA1AQ53H76 456 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 PPP4R4Q6NUP7 873 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 CATSPERGQ6ZRH7 1159 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 CHSY1Q86X52 802 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 ZNF280BQ86YH2 543 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 C16orf71Q8IYS4 520 aaPredicted RBP5.14□□□□□ -1.59
SMC4-215ENST00000484799 GALNT4Q8N4A0 578 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 ZNF366Q8N895 744 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 NGDNQ8NEJ9 315 aaKnown RBP5.14□□□□□ -1.59
SMC4-215ENST00000484799 KBTBD7Q8WVZ9 684 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 RAPGEF4Q8WZA2 1011 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 REPS1Q96D71 796 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 CIPCQ9C0C6 399 aa5.14□□□□□ -1.59
SMC4-215ENST00000484799 TYW1Q9NV66 732 aaKnown RBP5.14□□□□□ -1.59
SMC4-215ENST00000484799 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.14□□□□□ -1.59
SMC4-215ENST00000484799 TISP43B9A030 160 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms