RNA–Protein interactions for RNA: ENST00000484378.1

HLA-C-207, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 862 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-207ENST00000484378 BDNFP23560 247 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 CXCL12P48061 93 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 SATB1Q01826 763 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 ZNF268Q14587 947 aaPredicted RBP30.33■■■□□ 2.45
HLA-C-207ENST00000484378 Q6ZS52 159 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 SPEM1Q8N4L4 309 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 FSIP1Q8NA03 581 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 KIAA0895Q8NCT3 520 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 OR6B3Q8NGW1 331 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 FAM83CQ9BQN1 747 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 EPC1Q9H2F5 836 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 NCDNQ9UBB6 729 aa30.33■■■□□ 2.45
HLA-C-207ENST00000484378 SMG5Q9UPR3 1016 aaKnown RBP30.33■■■□□ 2.45
HLA-C-207ENST00000484378 TRAV19A0A0A6YYK7 116 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 PHACTR2O75167 634 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 TACC1O75410 805 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 CLSTN1O94985 981 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 CKMP06732 381 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 CMA1P23946 247 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 GNL1P36915 607 aaPredicted RBP30.32■■■□□ 2.44
HLA-C-207ENST00000484378 GRIK1P39086 918 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 KRT85P78386 507 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 STK4Q13043 487 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 KMT5BQ4FZB7 885 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 MDH1BQ5I0G3 518 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 WDR44Q5JSH3 913 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 TRIM68Q6AZZ1 485 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 DCLK2Q8N568 766 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 MYCBPAPQ8TBZ2 947 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 ZNF516Q92618 1163 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 PCED1BQ96HM7 432 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 SPATA17Q96L03 361 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 EBF3Q9H4W6 596 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 HPS4Q9NQG7 708 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 USP25Q9UHP3 1055 aa30.32■■■□□ 2.44
HLA-C-207ENST00000484378 DCHS1Q96JQ0 3298 aa30.31■■■□□ 2.44
HLA-C-207ENST00000484378 ANXA13P27216 316 aa30.31■■■□□ 2.44
HLA-C-207ENST00000484378 CASP4P49662 377 aa30.31■■■□□ 2.44
HLA-C-207ENST00000484378 MYL6P60660 151 aa30.31■■■□□ 2.44
HLA-C-207ENST00000484378 PSMD2Q13200 908 aa30.31■■■□□ 2.44
HLA-C-207ENST00000484378 RUNX3Q13761 415 aa30.31■■■□□ 2.44
HLA-C-207ENST00000484378 TTC16Q8NEE8 873 aa30.31■■■□□ 2.44
HLA-C-207ENST00000484378 RIN3Q8TB24 985 aa30.31■■■□□ 2.44
HLA-C-207ENST00000484378 SYAP1Q96A49 352 aaPredicted RBP30.31■■■□□ 2.44
HLA-C-207ENST00000484378 NXF1Q9UBU9 619 aaKnown RBP30.31■■■□□ 2.44
HLA-C-207ENST00000484378 PTPRDP23468 1912 aa30.3■■■□□ 2.44
HLA-C-207ENST00000484378 STAU1O95793 577 aaKnown RBP30.3■■■□□ 2.44
HLA-C-207ENST00000484378 USP17L7P0C7H9 530 aa30.3■■■□□ 2.44
HLA-C-207ENST00000484378 ATICP31939 592 aa30.3■■■□□ 2.44
HLA-C-207ENST00000484378 ID4P47928 161 aa30.3■■■□□ 2.44
HLA-C-207ENST00000484378 FAM160A1Q05DH4 1040 aa30.3■■■□□ 2.44
HLA-C-207ENST00000484378 BIRC3Q13489 604 aa30.3■■■□□ 2.44
HLA-C-207ENST00000484378 CCINQ13939 588 aa30.3■■■□□ 2.44
HLA-C-207ENST00000484378 CHAMP1Q96JM3 812 aa30.3■■■□□ 2.44
HLA-C-207ENST00000484378 CEP295NLQ96MC4 621 aa30.3■■■□□ 2.44
HLA-C-207ENST00000484378 NME7Q9Y5B8 376 aa30.3■■■□□ 2.44
HLA-C-207ENST00000484378 TRIM66O15016 1216 aa30.29■■■□□ 2.44
HLA-C-207ENST00000484378 FAM163BP0C2L3 166 aa30.29■■■□□ 2.44
HLA-C-207ENST00000484378 KCNB1Q14721 858 aa30.29■■■□□ 2.44
HLA-C-207ENST00000484378 MTF1Q14872 753 aa30.29■■■□□ 2.44
HLA-C-207ENST00000484378 PDGFRLQ15198 375 aa30.29■■■□□ 2.44
HLA-C-207ENST00000484378 DENND5BQ6ZUT9 1274 aa30.29■■■□□ 2.44
HLA-C-207ENST00000484378 PLEKHO2Q8TD55 490 aa30.29■■■□□ 2.44
HLA-C-207ENST00000484378 SLC22A12Q96S37 553 aa30.29■■■□□ 2.44
HLA-C-207ENST00000484378 XYLT2Q9H1B5 865 aa30.29■■■□□ 2.44
HLA-C-207ENST00000484378 HPSEQ9Y251 543 aa30.29■■■□□ 2.44
HLA-C-207ENST00000484378 GREB1Q4ZG55 1949 aa30.28■■■□□ 2.44
HLA-C-207ENST00000484378 MYL1P05976 194 aa30.28■■■□□ 2.44
HLA-C-207ENST00000484378 ARSAP15289 507 aa30.28■■■□□ 2.44
HLA-C-207ENST00000484378 TDRD10Q5VZ19 366 aaKnown RBP30.28■■■□□ 2.44
HLA-C-207ENST00000484378 SYNPOQ8N3V7 929 aa30.28■■■□□ 2.44
HLA-C-207ENST00000484378 SECISBP2LQ93073 1101 aaKnown RBP30.28■■■□□ 2.44
HLA-C-207ENST00000484378 CYP2S1Q96SQ9 504 aa30.28■■■□□ 2.44
HLA-C-207ENST00000484378 DPEP3Q9H4B8 488 aa30.28■■■□□ 2.44
HLA-C-207ENST00000484378 EHD2Q9NZN4 543 aa30.28■■■□□ 2.44
HLA-C-207ENST00000484378 ZDHHC9Q9Y397 364 aa30.28■■■□□ 2.44
HLA-C-207ENST00000484378 C2orf78A6NCI8 922 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 LRRIQ3A6PVS8 624 aaPredicted RBP30.27■■■□□ 2.44
HLA-C-207ENST00000484378 A8MXQ7 604 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 PTPN1P18031 435 aaKnown RBP30.27■■■□□ 2.44
HLA-C-207ENST00000484378 SYKP43405 635 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 AP3M2P53677 418 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 USP4Q13107 963 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 ZNF77Q15935 545 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 ZNF699Q32M78 642 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 SLC9A9Q8IVB4 645 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 ARL14EPQ8N8R7 260 aaPredicted RBP30.27■■■□□ 2.44
HLA-C-207ENST00000484378 PARD3BQ8TEW8 1205 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 KCTD10Q9H3F6 313 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 DMAC2Q9NW81 257 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 ANAPC1Q9H1A4 1944 aa30.27■■■□□ 2.44
HLA-C-207ENST00000484378 OTOL1A6NHN0 477 aaPredicted RBP30.26■■■□□ 2.43
HLA-C-207ENST00000484378 F8VP50 259 aa30.26■■■□□ 2.43
HLA-C-207ENST00000484378 PDE6CP51160 858 aa30.26■■■□□ 2.43
HLA-C-207ENST00000484378 AMPD2Q01433 879 aa30.26■■■□□ 2.43
HLA-C-207ENST00000484378 NCOA4Q13772 614 aa30.26■■■□□ 2.43
HLA-C-207ENST00000484378 B3GALNT2Q8NCR0 500 aa30.26■■■□□ 2.43
HLA-C-207ENST00000484378 ELOVL4Q9GZR5 314 aa30.26■■■□□ 2.43
HLA-C-207ENST00000484378 SMYD3Q9H7B4 428 aa30.26■■■□□ 2.43
HLA-C-207ENST00000484378 TRPM5Q9NZQ8 1165 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms