RNA–Protein interactions for RNA: ENST00000484246.5

UPF3A-208, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 699 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-208ENST00000484246 MYL4P12829 197 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 CD58P19256 250 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 WEE1P30291 646 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 MTIF2P46199 727 aaKnown RBP16.88■□□□□ 0.29
UPF3A-208ENST00000484246 RAD23BP54727 409 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 MYL5Q02045 173 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 UBALD2Q8IYN6 164 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 GIPC2Q8TF65 315 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 FAM81BQ96LP2 452 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 BPIFA3Q9BQP9 254 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 FUCA2Q9BTY2 467 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 KCNK12Q9HB15 430 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 TRPV4Q9HBA0 871 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 CSNK1G1Q9HCP0 422 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 DMAP1Q9NPF5 467 aaPredicted RBP16.88■□□□□ 0.29
UPF3A-208ENST00000484246 SAMSN1Q9NSI8 373 aaKnown RBP16.88■□□□□ 0.29
UPF3A-208ENST00000484246 GCNT4Q9P109 453 aa16.88■□□□□ 0.29
UPF3A-208ENST00000484246 KCNJ18B7U540 433 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 F8VP50 259 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 F11P03951 625 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 ACO1P21399 889 aaKnown RBP16.87■□□□□ 0.29
UPF3A-208ENST00000484246 DDX6P26196 483 aaKnown RBP eCLIP16.87■□□□□ 0.29
UPF3A-208ENST00000484246 ANXA13P27216 316 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 GABRR2P28476 465 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 CACNA2D1P54289 1103 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 MTMR3Q13615 1198 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 KCNJ12Q14500 433 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 TEAD2Q15562 447 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 VWA3BQ502W6 1294 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 TCP11X2Q5H9J9 407 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 MIIPQ5JXC2 388 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 ARHGAP17Q68EM7 881 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 POTEHQ6S545 545 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 DENND5BQ6ZUT9 1274 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 ENOSF1Q7L5Y1 443 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 TMEM150AQ86TG1 271 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 SCN4BQ8IWT1 228 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 SLC4A11Q8NBS3 891 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 SLC2A14Q8TDB8 520 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 ING5Q8WYH8 240 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 TMEM176AQ96HP8 235 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 ASB16Q96NS5 453 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 GCNAQ96QF7 691 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 TUBGCP2Q9BSJ2 902 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 PNPLA8Q9NP80 782 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 KRT82Q9NSB4 513 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 NCANO14594 1321 aa16.87■□□□□ 0.29
UPF3A-208ENST00000484246 NOTCH4Q99466 2003 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 A0A1W2PRU2 124 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 CLDN5O00501 218 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 ECI2O75521 394 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 TADA3O75528 432 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 ASGR2P07307 311 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 CCDC130P13994 396 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 FCARP24071 287 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 GRIK1P39086 918 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 CDR1P51861 262 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 ZXDAP98168 799 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 ORC1Q13415 861 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 TDGQ13569 410 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 NCAPHQ15003 741 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 TAF12Q16514 161 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 EXOC3L4Q17RC7 722 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 SKOR2Q2VWA4 1001 aaPredicted RBP16.86■□□□□ 0.29
UPF3A-208ENST00000484246 SDHAF4Q5VUM1 108 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 TRIM65Q6PJ69 517 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 GBP6Q6ZN66 633 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 PPM1KQ8N3J5 372 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 C12orf29Q8N999 325 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 GPR152Q8TDT2 470 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 EDAQ92838 391 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 NAT10Q9H0A0 1025 aaKnown RBP16.86■□□□□ 0.29
UPF3A-208ENST00000484246 NDST4Q9H3R1 872 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 COMMD8Q9NX08 183 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 IL37Q9NZH6 218 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 DUSP12Q9UNI6 340 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 CNTN6Q9UQ52 1028 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 NUMBLQ9Y6R0 609 aa16.86■□□□□ 0.29
UPF3A-208ENST00000484246 BDP1A6H8Y1 2624 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 FAM92AA1XBS5 289 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 TNFRSF10BO14763 440 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 PAEPP09466 180 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 FAM200BP0CF97 657 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 ZNF18P17022 549 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 ZNF132P52740 706 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 ARHGAP15Q53QZ3 475 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 PHLDB3Q6NSJ2 640 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 PARM1Q6UWI2 310 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 ARHGEF19Q8IW93 802 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 ZMIZ2Q8NF64 920 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 FGF14Q92915 247 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 SMARCD2Q92925 531 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 ELSPBP1Q96BH3 223 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 MCRS1Q96EZ8 462 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 CYFIP2Q96F07 1278 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 KREMEN1Q96MU8 473 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 MED10Q9BTT4 135 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 ATXN3LQ9H3M9 355 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 TASP1Q9H6P5 420 aa16.85■□□□□ 0.29
UPF3A-208ENST00000484246 FAM49BQ9NUQ9 324 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms