RNA–Protein interactions for RNA: ENST00000484194.1

HLA-E-202, Transcript of major histocompatibility complex, class I, E, humanhuman

Gene HLA-E, Length 726 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-E-202ENST00000484194 SLC9A9Q8IVB4 645 aa27.18■■□□□ 1.94
HLA-E-202ENST00000484194 SPEM1Q8N4L4 309 aa27.18■■□□□ 1.94
HLA-E-202ENST00000484194 STKLD1Q8NE28 680 aa27.18■■□□□ 1.94
HLA-E-202ENST00000484194 OR6B3Q8NGW1 331 aa27.18■■□□□ 1.94
HLA-E-202ENST00000484194 CRTAC1Q9NQ79 661 aa27.18■■□□□ 1.94
HLA-E-202ENST00000484194 GKN1Q9NS71 199 aa27.18■■□□□ 1.94
HLA-E-202ENST00000484194 HPSEQ9Y251 543 aa27.18■■□□□ 1.94
HLA-E-202ENST00000484194 CFAP54Q96N23 3096 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 TRAV19A0A0A6YYK7 116 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 TRIM66O15016 1216 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 USP17L7P0C7H9 530 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 CXCL12P48061 93 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 BIRC3Q13489 604 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 CCDC142Q17RM4 750 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 SYNPOQ8N3V7 929 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 KIAA0895Q8NCT3 520 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 TTC8Q8TAM2 541 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 FAM83CQ9BQN1 747 aa27.17■■□□□ 1.94
HLA-E-202ENST00000484194 PDXKO00764 312 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 CLSTN1O94985 981 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 BDNFP23560 247 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 MYL6P60660 151 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 FAM160A1Q05DH4 1040 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 TNK2Q07912 1038 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 TSSK4Q6SA08 328 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 SUMF1Q8NBK3 374 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 PARD3BQ8TEW8 1205 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 ZNF516Q92618 1163 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 PCED1BQ96HM7 432 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 MRPL45Q9BRJ2 306 aaKnown RBP27.16■■□□□ 1.94
HLA-E-202ENST00000484194 TRPC7Q9HCX4 862 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 DMAC2Q9NW81 257 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 NXF1Q9UBU9 619 aaKnown RBP27.16■■□□□ 1.94
HLA-E-202ENST00000484194 CCL26Q9Y258 94 aa27.16■■□□□ 1.94
HLA-E-202ENST00000484194 KIF26AQ9ULI4 1882 aaPredicted RBP27.15■■□□□ 1.94
HLA-E-202ENST00000484194 LILRB5O75023 590 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 RPN1P04843 607 aaKnown RBP27.15■■□□□ 1.94
HLA-E-202ENST00000484194 CKMP06732 381 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 CLDN10P78369 228 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 RUNX3Q13761 415 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 PDGFRLQ15198 375 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 MDH1BQ5I0G3 518 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 TXNDC11Q6PKC3 985 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 DENND5BQ6ZUT9 1274 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 SECISBP2LQ93073 1101 aaKnown RBP27.15■■□□□ 1.94
HLA-E-202ENST00000484194 EXOC4Q96A65 974 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 GZF1Q9H116 711 aaPredicted RBP27.15■■□□□ 1.94
HLA-E-202ENST00000484194 VRTNQ9H8Y1 702 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 ZDHHC9Q9Y397 364 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 GVINP1Q7Z2Y8 2422 aa27.15■■□□□ 1.94
HLA-E-202ENST00000484194 A8MXQ7 604 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 TADA3O75528 432 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 PFKLP17858 780 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 PTPN1P18031 435 aaKnown RBP27.14■■□□□ 1.94
HLA-E-202ENST00000484194 PPP3CCP48454 512 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 KCNB1Q14721 858 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 PON2Q15165 354 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 ZNF699Q32M78 642 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 CCDC34Q96HJ3 373 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 ELOVL4Q9GZR5 314 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 XYLT2Q9H1B5 865 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 EPC1Q9H2F5 836 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 KCTD10Q9H3F6 313 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 FRMD4BQ9Y2L6 1034 aa27.14■■□□□ 1.94
HLA-E-202ENST00000484194 FAM237AA0A1B0GTK4 181 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 A0A1W2PQ27 194 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 A0A1W2PQ64 194 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 A0A1W2PQD8 194 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 CALUO43852 315 aaPredicted RBP27.13■■□□□ 1.93
HLA-E-202ENST00000484194 NR3C1P04150 777 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 P4HA1P13674 534 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 ZNF667Q5HYK9 610 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 C8orf48Q96LL4 319 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 EBF3Q9H4W6 596 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 TRPM5Q9NZQ8 1165 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 NCDNQ9UBB6 729 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 ATP8B3O60423 1300 aa27.13■■□□□ 1.93
HLA-E-202ENST00000484194 DMDP11532 3685 aa27.12■■□□□ 1.93
HLA-E-202ENST00000484194 LRRIQ3A6PVS8 624 aaPredicted RBP27.12■■□□□ 1.93
HLA-E-202ENST00000484194 TDGF1P13385 188 aa27.12■■□□□ 1.93
HLA-E-202ENST00000484194 CASP4P49662 377 aa27.12■■□□□ 1.93
HLA-E-202ENST00000484194 NDUFA8P51970 172 aa27.12■■□□□ 1.93
HLA-E-202ENST00000484194 NOP14P78316 857 aaKnown RBP27.12■■□□□ 1.93
HLA-E-202ENST00000484194 GRSF1Q12849 480 aaKnown RBP eCLIP27.12■■□□□ 1.93
HLA-E-202ENST00000484194 NCOA4Q13772 614 aa27.12■■□□□ 1.93
HLA-E-202ENST00000484194 CCINQ13939 588 aa27.12■■□□□ 1.93
HLA-E-202ENST00000484194 MTF1Q14872 753 aa27.12■■□□□ 1.93
HLA-E-202ENST00000484194 TDRD10Q5VZ19 366 aaKnown RBP27.12■■□□□ 1.93
HLA-E-202ENST00000484194 B3GALNT2Q8NCR0 500 aa27.12■■□□□ 1.93
HLA-E-202ENST00000484194 TMC2Q8TDI7 906 aa27.12■■□□□ 1.93
HLA-E-202ENST00000484194 RBM12Q9NTZ6 932 aaKnown RBP27.12■■□□□ 1.93
HLA-E-202ENST00000484194 PTPRDP23468 1912 aa27.12■■□□□ 1.93
HLA-E-202ENST00000484194 EP300Q09472 2414 aaPredicted RBP27.11■■□□□ 1.93
HLA-E-202ENST00000484194 PAPSS2O95340 614 aaPredicted RBP27.11■■□□□ 1.93
HLA-E-202ENST00000484194 HDCP19113 662 aa27.11■■□□□ 1.93
HLA-E-202ENST00000484194 CPA6Q8N4T0 437 aa27.11■■□□□ 1.93
HLA-E-202ENST00000484194 PLEKHO2Q8TD55 490 aa27.11■■□□□ 1.93
HLA-E-202ENST00000484194 TNIP3Q96KP6 325 aa27.11■■□□□ 1.93
HLA-E-202ENST00000484194 TTLL2Q9BWV7 592 aa27.11■■□□□ 1.93
HLA-E-202ENST00000484194 HPS4Q9NQG7 708 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms