RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 PRDX5P30044 214 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 MMP14P50281 582 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 PER3P56645 1201 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 MGAT5Q09328 741 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 EIF4A2Q14240 407 aaKnown RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 WTAPQ15007 396 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 UBE3CQ15386 1083 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 MAPKAPK3Q16644 382 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 TSTQ16762 297 aaKnown RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 TRIM71Q2Q1W2 868 aaKnown RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 ATPAF1Q5TC12 328 aaPredicted RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 NAA35Q5VZE5 725 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 RRAGBQ5VZM2 374 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 VASNQ6EMK4 673 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 NFRKBQ6P4R8 1299 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 TMTC3Q6ZXV5 915 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 KRT28Q7Z3Y7 464 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 BMP8AQ7Z5Y6 402 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 MICU3Q86XE3 530 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 PPP1R3BQ86XI6 285 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 YAF2Q8IY57 180 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 TMEM57Q8N5G2 664 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 NUDT10Q8NFP7 164 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 CEP70Q8NHQ1 597 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 WDR48Q8TAF3 677 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 Q8TCH9 128 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 MAML1Q92585 1016 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 RSC1A1Q92681 617 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 NUDT11Q96G61 164 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 PPP1R9BQ96SB3 815 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 ARHGAP39Q9C0H5 1083 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 KIAA1683Q9H0B3 1180 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 PCED1AQ9H1Q7 454 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 MEGF9Q9H1U4 602 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 CHST8Q9H2A9 424 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 PABPC3Q9H361 631 aaKnown RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 SYNCQ9H7C4 482 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 SEC61A2Q9H9S3 476 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 SMURF2Q9HAU4 748 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 A1CFQ9NQ94 594 aaKnown RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 DLL4Q9NR61 685 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 TBC1D23Q9NUY8 699 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 SIDT1Q9NXL6 827 aaKnown RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 RBPJLQ9UBG7 517 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 MTO1Q9Y2Z2 717 aaKnown RBP4.97□□□□□ -1.61
PTCD3-214ENST00000483925 HS3ST3A1Q9Y663 406 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 PASKQ96RG2 1323 aa4.97□□□□□ -1.61
PTCD3-214ENST00000483925 GTPBP10A4D1E9 387 aaKnown RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 GTPBP1O00178 669 aaKnown RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 FCHO1O14526 889 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 TSPAN9O75954 239 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 KLHL18O94889 574 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 GLP2RO95838 553 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 CHGBP05060 677 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 PRKCBP05771 671 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 ACADMP11310 421 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 NPPBP16860 134 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 RXRAP19793 462 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 KLRC1P26715 233 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 APEX1P27695 318 aaKnown RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 IL1R2P27930 398 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 HOXC13P31276 330 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 ACTN2P35609 894 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 CCR9P51686 369 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 MXRA7P84157 204 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 GRIN1Q05586 938 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 WASHC5Q12768 1159 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 DCTN1Q14203 1278 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 ANKRD1Q15327 319 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 MAN2A1Q16706 1144 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 ARHGAP15Q53QZ3 475 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 HS1BP3Q53T59 392 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 SPDYAQ5MJ70 313 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 SLC10A5Q5PT55 438 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 LRCH2Q5VUJ6 765 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 LMBRD2Q68DH5 695 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 KDELC2Q7Z4H8 507 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 RALYLQ86SE5 291 aaKnown RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 CHD1LQ86WJ1 897 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 FAM90A1Q86YD7 464 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 GALNT13Q8IUC8 556 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 ARMC8Q8IUR7 673 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 SLC44A2Q8IWA5 706 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 CELF5Q8N6W0 485 aaKnown RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 ARL10Q8N8L6 244 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 IFI44Q8TCB0 444 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 HOXB13Q92826 284 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 NEIL1Q96FI4 390 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 HIC2Q96JB3 615 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 TWNKQ96RR1 684 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 RTKNQ9BST9 563 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 HEYLQ9NQ87 328 aaPredicted RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 INCENPQ9NQS7 918 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 PRDM8Q9NQV8 689 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 EIF2B3Q9NR50 452 aaKnown RBP4.96□□□□□ -1.62
PTCD3-214ENST00000483925 ZNF112Q9UJU3 913 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 ZDHHC8Q9ULC8 765 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 CA14Q9ULX7 337 aa4.96□□□□□ -1.62
PTCD3-214ENST00000483925 SNX8Q9Y5X2 465 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms