RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 SMTNL2Q2TAL5 461 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 GOLGA7BQ2TAP0 167 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 MFSD7Q6UXD7 560 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 CCDC50Q8IVM0 306 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 SCUBE3Q8IX30 993 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 NIPA2Q8N8Q9 360 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 PXYLP1Q8TE99 480 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 SLC35F5Q8WV83 523 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 LRRC19Q9H756 370 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 GDAP2Q9NXN4 497 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 PADI3Q9ULW8 664 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 SNX24Q9Y343 169 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 UTP11Q9Y3A2 253 aaKnown RBP9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 RALGAPA2Q2PPJ7 1873 aa9.32□□□□□ -0.92
CDC42SE1-204ENST00000483763 ATP2C2O75185 946 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 CCDC130P13994 396 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 IBSPP21815 317 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 PSMA2P25787 234 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 PSEN1P49768 467 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 SLC25A11Q02978 314 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 CUL1Q13616 776 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 ITGA7Q13683 1181 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 PIGHQ14442 188 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 AGMOQ6ZNB7 445 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 FAM183BPQ6ZVS7 135 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 LIMS2Q7Z4I7 341 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 RPAINQ86UA6 219 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 CCDC105Q8IYK2 499 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 IQCKQ8N0W5 287 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 C3orf58Q8NDZ4 430 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 EXD1Q8NHP7 514 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 KHSRPQ92945 711 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 MCRS1Q96EZ8 462 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 OSBPL8Q9BZF1 889 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 ZDHHC18Q9NUE0 388 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 GRHL1Q9NZI5 618 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 GOLGA6BA6NDN3 693 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 ARL5CA6NH57 179 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 ATF7P17544 494 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 GNL1P36915 607 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 RPL21P46778 160 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 CLCNKBP51801 687 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 ACLYP53396 1101 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 GSCP56915 257 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 DHX34Q14147 1143 aaKnown RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 ZNF268Q14587 947 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 LPIN1Q14693 890 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 CLUL1Q15846 466 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 UAP1Q16222 522 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 KIAA0319Q5VV43 1072 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 KAZNQ674X7 775 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 SMYD5Q6GMV2 418 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 ZDHHC24Q6UX98 284 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 RNF180Q86T96 592 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 PRUNE1Q86TP1 453 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 RSPH3Q86UC2 560 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 OSTM1Q86WC4 334 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 C12orf50Q8NA57 414 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 FBXO25Q8TCJ0 367 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 ZIM3Q96PE6 472 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 SLITRK1Q96PX8 696 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 RNF208Q9H0X6 261 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 TSPYL2Q9H2G4 693 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 FAM124BQ9H5Z6 455 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 HMX1Q9NP08 348 aaPredicted RBP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 MTUS1Q9ULD2 1270 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 KIAA1257Q9ULG3 409 aa9.31□□□□□ -0.92
CDC42SE1-204ENST00000483763 C3orf70A6NLC5 250 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 KRT14P02533 472 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 CD48P09326 243 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 ACAT1P24752 427 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 TKTP29401 623 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 LRPAP1P30533 357 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 TAF6P49848 677 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 TAP1Q03518 808 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 PPP2R5EQ16537 467 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 TRIM71Q2Q1W2 868 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 FAM102AQ5T9C2 384 aaPredicted RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 WSCD1Q658N2 575 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 LHX8Q68G74 356 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 UNC93AQ86WB7 457 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 CRYBG2Q8N1P7 616 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 EIF1ADQ8N9N8 165 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 PCSK9Q8NBP7 692 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 SLAIN1Q8ND83 568 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 APPL2Q8NEU8 664 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 FNIP1Q8TF40 1166 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 CLEC4CQ8WTT0 213 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 PLVAPQ9BX97 442 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 ADAM33Q9BZ11 813 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 DCLK3Q9C098 648 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 TRPV6Q9H1D0 765 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 ZWILCHQ9H900 591 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 PCSK1NQ9UHG2 260 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 FAN1Q9Y2M0 1017 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 PDCD11Q14690 1871 aaKnown RBP9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 FAM187AA6NFU0 413 aa9.3□□□□□ -0.92
CDC42SE1-204ENST00000483763 PAPSS1O43252 624 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms