RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 BEST1O76090 585 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 C1RP00736 705 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 FAM200BP0CF97 657 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 SOX5P35711 763 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 TUFMP49411 452 aaKnown RBP18.91■□□□□ 0.62
CPNE1-224ENST00000483359 ZNF75DP51815 510 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 SPECC1LQ69YQ0 1117 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 VSTM4Q8IW00 320 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 HDAC7Q8WUI4 952 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 HLA-CQ95604 372 aa18.91■□□□□ 0.62
CPNE1-224ENST00000483359 MYH10P35580 1976 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 O00370 1275 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 STAT1P42224 750 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 MAP3K7CLP57077 242 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 PTK2Q05397 1052 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 BAP1Q92560 729 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 ZDHHC7Q9NXF8 308 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 MAFFQ9ULX9 164 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 DAAM1Q9Y4D1 1078 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 ITIH6Q6UXX5 1313 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 FAM170AA1A519 330 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 M0QYV0 167 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 GYPCP04921 128 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 ARHGAP17Q68EM7 881 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 VSTM1Q6UX27 236 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 TMC6Q7Z403 805 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 UBA3Q8TBC4 463 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 MSLNLQ96KJ4 702 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 SMOQ99835 787 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 NUP58Q9BVL2 599 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 PIDD1Q9HB75 910 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 HCFC1R1Q9NWW0 138 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 HSFX1Q9UBD0 423 aa18.9■□□□□ 0.62
CPNE1-224ENST00000483359 CFHP08603 1231 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 ANXA13P27216 316 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 MAGEA11P43364 429 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 PDE6CP51160 858 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 TFF2Q03403 129 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 IFRD2Q12894 506 aaPredicted RBP18.89■□□□□ 0.61
CPNE1-224ENST00000483359 MTMR3Q13615 1198 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 TAF3Q5VWG9 929 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 CLEC20AQ6ZU45 233 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 TTC30AQ86WT1 665 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 ZNF606Q8WXB4 792 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 SMG7Q92540 1137 aaKnown RBP18.89■□□□□ 0.61
CPNE1-224ENST00000483359 ZNF707Q96C28 371 aaPredicted RBP18.89■□□□□ 0.61
CPNE1-224ENST00000483359 PRKD2Q9BZL6 878 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 DMAP1Q9NPF5 467 aaPredicted RBP18.89■□□□□ 0.61
CPNE1-224ENST00000483359 HESX1Q9UBX0 185 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.89■□□□□ 0.612e-6■■■■■ 55.4
CPNE1-224ENST00000483359 C2orf16Q68DN1 1984 aa18.89■□□□□ 0.61
CPNE1-224ENST00000483359 UNC80Q8N2C7 3258 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 GOLGA6L3A6NEY3 463 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 TRIM66O15016 1216 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 MICAL2O94851 1124 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 CYP11B1P15538 503 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 NPR3P17342 541 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 HOXB8P17481 243 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-224ENST00000483359 CASP14P31944 242 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 EPHB3P54753 998 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 RPL10AP62906 217 aaKnown RBP18.88■□□□□ 0.61
CPNE1-224ENST00000483359 FIGNQ5HY92 759 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 PASD1Q8IV76 773 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 ZMIZ2Q8NF64 920 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 CD207Q9UJ71 328 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 KIAA1257Q9ULG3 409 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 MAGED2Q9UNF1 606 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-224ENST00000483359 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.88■□□□□ 0.618e-7■□□□□ 11.3
CPNE1-224ENST00000483359 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-224ENST00000483359 XYLBO75191 536 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 HNRNPA1P09651 372 aaKnown RBP eCLIP18.88■□□□□ 0.61
CPNE1-224ENST00000483359 HOXA9P31269 272 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 PLD1Q13393 1074 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 VEPH1Q14D04 833 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 E4F1Q66K89 784 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-224ENST00000483359 GRASPQ7Z6J2 395 aaPredicted RBP18.88■□□□□ 0.61
CPNE1-224ENST00000483359 NOP9Q86U38 636 aaKnown RBP18.88■□□□□ 0.61
CPNE1-224ENST00000483359 ELMOD1Q8N336 334 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 EPS8L1Q8TE68 723 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 CORO1BQ9BR76 489 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 DUSP16Q9BY84 665 aa18.88■□□□□ 0.61
CPNE1-224ENST00000483359 TULP2O00295 520 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 NTHL1P78549 312 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 GOLGA8FQ08AF8 430 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 GOLGA8DPQ0D2H9 430 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 TAF12Q16514 161 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 CES5AQ6NT32 575 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 LCLAT1Q6UWP7 414 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 ANKRD52Q8NB46 1076 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 SMRP1Q8NCR6 262 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 SLC20A1Q8WUM9 679 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 S1PR5Q9H228 398 aa18.87■□□□□ 0.61
CPNE1-224ENST00000483359 MED7O43513 233 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 ADCY5O95622 1261 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 BCAT1P54687 386 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 BPIFB4P59827 614 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 PDE4CQ08493 712 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 CNGA2Q16280 664 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 HS6ST3Q8IZP7 471 aa18.86■□□□□ 0.61
CPNE1-224ENST00000483359 MRFAP1L1Q96HT8 127 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms