RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 CHRNB2P17787 502 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 CD247P20963 164 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 RPA1P27694 616 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 TPTEP56180 551 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 CDK18Q07002 472 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 RAPGEF1Q13905 1077 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 CCNIQ14094 377 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 OXA1LQ15070 435 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 LSM12Q3MHD2 195 aaKnown RBP8.17□□□□□ -1.1
COL4A5-205ENST00000483338 AADACL2Q6P093 401 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 KYAT3Q6YP21 454 aaKnown RBP8.17□□□□□ -1.1
COL4A5-205ENST00000483338 VPS37AQ8NEZ2 397 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 GRIN3AQ8TCU5 1115 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 SNX29Q8TEQ0 813 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 JDP2Q8WYK2 163 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 MAML1Q92585 1016 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 TTC25Q96NG3 672 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 POTECB2RU33 542 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 B4E1Z4 1266 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 XPO1O14980 1071 aaKnown RBP8.17□□□□□ -1.1
COL4A5-205ENST00000483338 ENO1P06733 434 aaKnown RBP8.17□□□□□ -1.1
COL4A5-205ENST00000483338 POLR2MP0CAP2 368 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 PCP11498 1178 aaKnown RBP8.17□□□□□ -1.1
COL4A5-205ENST00000483338 FCER1AP12319 257 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 EPS15P42566 896 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 CASP5P51878 434 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 B2MP61769 119 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 NR1H3Q13133 447 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 TUBA3CQ13748 450 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 CTTNQ14247 550 aaKnown RBP8.17□□□□□ -1.1
COL4A5-205ENST00000483338 TMED2Q15363 201 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 SMU1Q2TAY7 513 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 LMBR1LQ6UX01 489 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 ZDHHC14Q8IZN3 488 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 CLIP4Q8N3C7 705 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 SRBD1Q8N5C6 995 aaKnown RBP8.17□□□□□ -1.1
COL4A5-205ENST00000483338 SLC15A4Q8N697 577 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 TRIML2Q8N7C3 387 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 TSPAN14Q8NG11 270 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 VMP1Q96GC9 406 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 PYM1Q9BRP8 204 aaKnown RBP8.17□□□□□ -1.1
COL4A5-205ENST00000483338 TMEM120AQ9BXJ8 343 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 MRPL9Q9BYD2 267 aaKnown RBP8.17□□□□□ -1.1
COL4A5-205ENST00000483338 NMUR2Q9GZQ4 415 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 Q9H521 79 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 SPEF1Q9Y4P9 236 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 PPME1Q9Y570 386 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 UTYO14607 1347 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 SPATA31A5Q5VU36 1347 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 SPATA31A7Q8IWB4 1347 aa8.17□□□□□ -1.1
COL4A5-205ENST00000483338 PODXLO00592 558 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 PRPF4O43172 522 aaKnown RBP eCLIP8.16□□□□□ -1.1
COL4A5-205ENST00000483338 PDE8AO60658 829 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 KLHL41O60662 606 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 ZC3H11AO75152 810 aaKnown RBP eCLIP8.16□□□□□ -1.1
COL4A5-205ENST00000483338 ATE1O95260 518 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 IFIT1P09914 478 aaKnown RBP8.16□□□□□ -1.1
COL4A5-205ENST00000483338 RAG1P15918 1043 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 NR4A2P43354 598 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 HP1BP3Q5SSJ5 553 aaPredicted RBP8.16□□□□□ -1.1
COL4A5-205ENST00000483338 ZNF746Q6NUN9 644 aaPredicted RBP8.16□□□□□ -1.1
COL4A5-205ENST00000483338 SGMS1Q86VZ5 419 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 PLPP6Q8IY26 295 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 TRIM22Q8IYM9 498 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 DEPDC4Q8N2C3 294 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 PRELID2Q8N945 189 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 TANKQ92844 425 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 SDCCAG3Q96C92 435 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 PGBD4Q96DM1 585 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 ZNF641Q96N77 438 aaPredicted RBP8.16□□□□□ -1.1
COL4A5-205ENST00000483338 COQ7Q99807 217 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 C17orf80Q9BSJ5 609 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 IMPG2Q9BZV3 1241 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.16□□□□□ -1.16e-7■■■□□ 15.6
COL4A5-205ENST00000483338 PCYOX1Q9UHG3 505 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 RAB26Q9ULW5 256 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 DIS3Q9Y2L1 958 aaKnown RBP8.16□□□□□ -1.1
COL4A5-205ENST00000483338 PEAK1Q9H792 1746 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 CROCCQ5TZA2 2017 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 CCDC88AQ3V6T2 1871 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 CAMTA1Q9Y6Y1 1673 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 FLT1P17948 1338 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 CAPN14A8MX76 684 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 CFAP99D6REC4 459 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 H7C0C1 242 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 SCO2O43819 266 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 SORBS2O94875 1100 aaKnown RBP8.16□□□□□ -1.1
COL4A5-205ENST00000483338 KLHL2O95198 593 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 BMP15O95972 392 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 ALAS1P13196 640 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 WEE1P30291 646 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 ZAP70P43403 619 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 ALDH1A3P47895 512 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 KRT6CP48668 564 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 NDST2P52849 883 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 GBE1Q04446 702 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 KDSRQ06136 332 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 MDH1BQ5I0G3 518 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 EFHC1Q5JVL4 640 aa8.16□□□□□ -1.1
COL4A5-205ENST00000483338 TTC38Q5R3I4 469 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms