RNA–Protein interactions for RNA: ENST00000482878.5

CCDC78-213, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,458 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-213ENST00000482878 GARTP22102 1010 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 SFNP31947 248 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 PIK3CAP42336 1068 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 ACOT2P49753 483 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 SH3BGRP55822 239 aaPredicted RBP13□□□□□ -0.33
CCDC78-213ENST00000482878 NLRP11P59045 1033 aaKnown RBP13□□□□□ -0.33
CCDC78-213ENST00000482878 GHRHRQ02643 423 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 AP1B1Q10567 949 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 GPS1Q13098 491 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 LSAMPQ13449 338 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 SLC1A5Q15758 541 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 MFSD7Q6UXD7 560 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 NLRP9Q7RTR0 991 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 PDCD2LQ9BRP1 358 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 MRPL47Q9HD33 250 aaKnown RBP13□□□□□ -0.33
CCDC78-213ENST00000482878 XPNPEP1Q9NQW7 623 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 DDX18Q9NVP1 670 aaKnown RBP13□□□□□ -0.33
CCDC78-213ENST00000482878 PCDHB4Q9Y5E5 795 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 A0A1W2PPM1 405 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 PRPF4O43172 522 aaKnown RBP eCLIP13□□□□□ -0.33
CCDC78-213ENST00000482878 PEX10O60683 326 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 T-ENOLP0DO92 83 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 FGFR1P11362 822 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 GNA15P30679 374 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 CETN2P41208 172 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 KRT76Q01546 638 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 SPARCL1Q14515 664 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 MFSD4BQ5TF39 518 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 FYB2Q5VWT5 728 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 SCARA3Q6AZY7 606 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 DLK2Q6UY11 383 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 MARK2Q7KZI7 788 aaKnown RBP13□□□□□ -0.33
CCDC78-213ENST00000482878 FNBP1Q96RU3 617 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 CADM1Q9BY67 442 aaKnown RBP13□□□□□ -0.33
CCDC78-213ENST00000482878 SYNCQ9H7C4 482 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 VPS37BQ9H9H4 285 aa13□□□□□ -0.33
CCDC78-213ENST00000482878 A0A0G2JND7 137 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 BANF1O75531 89 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 STBD1O95210 358 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 CLDN10P78369 228 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 CUL2Q13617 745 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 TDRPQ86YL5 185 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 KBTBD2Q8IY47 623 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.99□□□□□ -0.33
CCDC78-213ENST00000482878 FEZF2Q8TBJ5 459 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 WDR60Q8WVS4 1066 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 ACSF2Q96CM8 615 aaPredicted RBP12.99□□□□□ -0.33
CCDC78-213ENST00000482878 FAM161BQ96MY7 647 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 FOXP3Q9BZS1 431 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 ANGPTL2Q9UKU9 493 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 TPD52L2O43399 206 aaKnown RBP12.99□□□□□ -0.33
CCDC78-213ENST00000482878 EXTL3O43909 919 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 CCDC22O60826 627 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 EDF1O60869 148 aaKnown RBP12.99□□□□□ -0.33
CCDC78-213ENST00000482878 NR1H3Q13133 447 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 PDK4Q16654 411 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 CCDC142Q17RM4 750 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 WDR72Q3MJ13 1102 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 SPDYE2Q495Y8 402 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 TXNRD3NBQ6F5E7 133 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 ZBED8Q8IZ13 594 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 NAT14Q8WUY8 206 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 SLITRK1Q96PX8 696 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 PXMP2Q9NR77 195 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 PCDHA10Q9Y5I2 948 aa12.99□□□□□ -0.33
CCDC78-213ENST00000482878 SIGLEC16A6NMB1 481 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 PIAS1O75925 651 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 HAUS5O94927 633 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 EGFRP00533 1210 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 FUT4P22083 530 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 CA4P22748 312 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 CDK7P50613 346 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 PSMD6Q15008 389 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 STYK1Q6J9G0 422 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 DPY19L2Q6NUT2 758 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 ISLR2Q6UXK2 745 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 ARMCX6Q7L4S7 300 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 PHF13Q86YI8 300 aaPredicted RBP12.98□□□□□ -0.33
CCDC78-213ENST00000482878 ALLCQ8N6M5 410 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 SH3TC2Q8TF17 1288 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 HAPLN2Q9GZV7 340 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 TSPYL2Q9H2G4 693 aaPredicted RBP12.98□□□□□ -0.33
CCDC78-213ENST00000482878 C17orf75Q9HAS0 396 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 SLC38A10Q9HBR0 1119 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 IVNS1ABPQ9Y6Y0 642 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 ZNF541Q9H0D2 1346 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 CPA2P48052 419 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 GALK1P51570 392 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 NOP14P78316 857 aaKnown RBP12.98□□□□□ -0.33
CCDC78-213ENST00000482878 COG7P83436 770 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 DSG1Q02413 1049 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 LMNB2Q03252 620 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 ZNF252P-AS1Q0IIN9 211 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 OVGP1Q12889 678 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 R3HDM1Q15032 1099 aaKnown RBP12.98□□□□□ -0.33
CCDC78-213ENST00000482878 EAPPQ56P03 285 aaPredicted RBP12.98□□□□□ -0.33
CCDC78-213ENST00000482878 C6orf163Q5TEZ5 329 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 RSBN1LQ6PCB5 846 aaPredicted RBP12.98□□□□□ -0.33
CCDC78-213ENST00000482878 RGS9BPQ6ZS82 235 aa12.98□□□□□ -0.33
CCDC78-213ENST00000482878 MIPEPQ99797 713 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms