RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 RXFP1Q9HBX9 757 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 CRTAC1Q9NQ79 661 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 FAM49BQ9NUQ9 324 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 AIPL1Q9NZN9 384 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 KIAA1257Q9ULG3 409 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 MFAP3LO75121 409 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 VDRP11473 427 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 FERP16591 822 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 KLRC2P26717 231 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 GNA15P30679 374 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 NDUFV1P49821 464 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 ROR1Q01973 937 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 CYP27A1Q02318 531 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 GPR17Q13304 367 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 ZSCAN26Q16670 478 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 CCDC142Q17RM4 750 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 SGO2Q562F6 1265 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 FAM171BQ6P995 826 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 MYCBPAPQ8TBZ2 947 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 MRPL38Q96DV4 380 aaKnown RBP12.29□□□□□ -0.44
HPS4-212ENST00000481910 CYFIP2Q96F07 1278 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 PCED1BQ96HM7 432 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 KLHL5Q96PQ7 755 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 PRDM12Q9H4Q4 367 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 ABHD10Q9NUJ1 306 aa12.29□□□□□ -0.44
HPS4-212ENST00000481910 THAP12O43422 761 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 ADH1AP07327 375 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 CYP11B1P15538 503 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 PDE6CP51160 858 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 IRX1P78414 480 aaPredicted RBP12.28□□□□□ -0.44
HPS4-212ENST00000481910 GRIN2CQ14957 1233 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 ASIC2Q16515 512 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 IRF2BP2Q7Z5L9 587 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 RBM23Q86U06 439 aaKnown RBP12.28□□□□□ -0.44
HPS4-212ENST00000481910 PALB2Q86YC2 1186 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 ZNF461Q8TAF7 563 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 ZNF606Q8WXB4 792 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 TFAP2BQ92481 460 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 SYN2Q92777 582 aaPredicted RBP12.28□□□□□ -0.44
HPS4-212ENST00000481910 FAM161BQ96MY7 647 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 PGLYRP2Q96PD5 576 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 DNAJC7Q99615 494 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 PKMYT1Q99640 499 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 DEF6Q9H4E7 631 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 TMLHEQ9NVH6 421 aa12.28□□□□□ -0.44
HPS4-212ENST00000481910 WDR27A2RRH5 827 aa12.27□□□□□ -0.44
HPS4-212ENST00000481910 CCDC130P13994 396 aa12.27□□□□□ -0.44
HPS4-212ENST00000481910 SMARCB1Q12824 385 aa12.27□□□□□ -0.44
HPS4-212ENST00000481910 RAB33AQ14088 237 aa12.27□□□□□ -0.44
HPS4-212ENST00000481910 NFE2Q16621 373 aaPredicted RBP12.27□□□□□ -0.44
HPS4-212ENST00000481910 HABP4Q5JVS0 413 aaKnown RBP12.27□□□□□ -0.44
HPS4-212ENST00000481910 PPP1R26Q5T8A7 1209 aaPredicted RBP12.27□□□□□ -0.44
HPS4-212ENST00000481910 E4F1Q66K89 784 aaPredicted RBP12.27□□□□□ -0.44
HPS4-212ENST00000481910 RNF19BQ6ZMZ0 732 aa12.27□□□□□ -0.44
HPS4-212ENST00000481910 C4orf50Q6ZRC1 276 aa12.27□□□□□ -0.44
HPS4-212ENST00000481910 SPATA2LQ8IUW3 424 aaPredicted RBP12.27□□□□□ -0.44
HPS4-212ENST00000481910 TC2NQ8N9U0 490 aa12.27□□□□□ -0.44
HPS4-212ENST00000481910 SLC2A14Q8TDB8 520 aa12.27□□□□□ -0.44
HPS4-212ENST00000481910 MED10Q9BTT4 135 aa12.27□□□□□ -0.44
HPS4-212ENST00000481910 ZNHIT6Q9NWK9 470 aaKnown RBP12.27□□□□□ -0.44
HPS4-212ENST00000481910 CHCHD3Q9NX63 227 aaKnown RBP12.27□□□□□ -0.44
HPS4-212ENST00000481910 ABI2Q9NYB9 513 aaPredicted RBP12.27□□□□□ -0.44
HPS4-212ENST00000481910 SUN2Q9UH99 717 aa12.27□□□□□ -0.44
HPS4-212ENST00000481910 MYH10P35580 1976 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 CLDN5O00501 218 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 PER2O15055 1255 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 MED7O43513 233 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 ABLIM3O94929 683 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 SKILP12757 684 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 ADORA2BP29275 332 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 ADCY1Q08828 1119 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 KLHL30Q0D2K2 578 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 NOP9Q86U38 636 aaKnown RBP12.27□□□□□ -0.45
HPS4-212ENST00000481910 FUKQ8N0W3 1084 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 ATAD1Q8NBU5 361 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 EPS8L1Q8TE68 723 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 MYLPFQ96A32 169 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 HNRNPABQ99729 332 aaKnown RBP12.27□□□□□ -0.45
HPS4-212ENST00000481910 ZSWIM1Q9BR11 485 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 B3GNT5Q9BYG0 378 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 HAUS4Q9H6D7 363 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 CWC15Q9P013 229 aaKnown RBP12.27□□□□□ -0.45
HPS4-212ENST00000481910 PCDHB5Q9Y5E4 795 aa12.27□□□□□ -0.45
HPS4-212ENST00000481910 COL4A4P53420 1690 aaPredicted RBP12.27□□□□□ -0.45
HPS4-212ENST00000481910 MTMR11A4FU01 709 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 O00370 1275 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 SPATA31D3P0C874 917 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 ATF2P15336 505 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 CASQ1P31415 396 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 HNRNPH3P31942 346 aaKnown RBP12.26□□□□□ -0.45
HPS4-212ENST00000481910 SSTR3P32745 418 aaPredicted RBP12.26□□□□□ -0.45
HPS4-212ENST00000481910 ARID5BQ14865 1188 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 STILQ15468 1287 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 CNGA2Q16280 664 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 TDRD12Q587J7 1177 aaKnown RBP12.26□□□□□ -0.45
HPS4-212ENST00000481910 TPGS2Q68CL5 300 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 ARHGAP17Q68EM7 881 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 SPATA31D4Q6ZUB0 917 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 CCDC186Q7Z3E2 898 aa12.26□□□□□ -0.45
HPS4-212ENST00000481910 ADGRD2Q7Z7M1 963 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms