RNA–Protein interactions for RNA: ENST00000481690.2

GPCPD1-206, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 3

Gene GPCPD1, Length 819 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-206ENST00000481690 PPP2R5DQ14738 602 aa23.73■■□□□ 1.39
GPCPD1-206ENST00000481690 ITPRIPL2Q3MIP1 535 aa23.73■■□□□ 1.39
GPCPD1-206ENST00000481690 MDH1BQ5I0G3 518 aa23.73■■□□□ 1.39
GPCPD1-206ENST00000481690 MYRFLQ96LU7 910 aa23.73■■□□□ 1.39
GPCPD1-206ENST00000481690 GZF1Q9H116 711 aaPredicted RBP23.73■■□□□ 1.39
GPCPD1-206ENST00000481690 EP300Q09472 2414 aaPredicted RBP23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 DMDP11532 3685 aa23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 ANXA13P27216 316 aa23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 SYKP43405 635 aa23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 TRIM68Q6AZZ1 485 aa23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 CC2D1AQ6P1N0 951 aaPredicted RBP23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 VSTM1Q6UX27 236 aa23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 PLEKHO2Q8TD55 490 aa23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 SYAP1Q96A49 352 aaPredicted RBP23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 PCED1BQ96HM7 432 aa23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 EBF3Q9H4W6 596 aa23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 HPSEQ9Y251 543 aa23.72■■□□□ 1.39
GPCPD1-206ENST00000481690 TRAV19A0A0A6YYK7 116 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 SOBPA7XYQ1 873 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 TACC1O75410 805 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 CKMP06732 381 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 Q6ZS52 159 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 FSIP1Q8NA03 581 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 SUMF1Q8NBK3 374 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 ZBTB44Q8NCP5 570 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 MYCBPAPQ8TBZ2 947 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 RUBCNQ92622 972 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 DPEP3Q9H4B8 488 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 NME7Q9Y5B8 376 aa23.71■■□□□ 1.39
GPCPD1-206ENST00000481690 LRRIQ3A6PVS8 624 aaPredicted RBP23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 A8MXQ7 604 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 RPN1P04843 607 aaKnown RBP23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 PRR29P0C7W0 189 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 ATICP31939 592 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 CXCL12P48061 93 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 NDUFA8P51970 172 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 SATB1Q01826 763 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 RUNX3Q13761 415 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 GAS6Q14393 721 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 ZNF699Q32M78 642 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 WDR44Q5JSH3 913 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 DGKKQ5KSL6 1271 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 TDRD10Q5VZ19 366 aaKnown RBP23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 KIAA2013Q8IYS2 634 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 RIN3Q8TB24 985 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 NELL1Q92832 810 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 SPATA17Q96L03 361 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 SLC22A12Q96S37 553 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 CYP2S1Q96SQ9 504 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 FAM83CQ9BQN1 747 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 FAM126AQ9BYI3 521 aaPredicted RBP23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 HPS4Q9NQG7 708 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 ATP6V1DQ9Y5K8 247 aa23.7■■□□□ 1.38
GPCPD1-206ENST00000481690 ATG2BQ96BY7 2078 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 SPTBN4Q9H254 2564 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 MYH10P35580 1976 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 OTOGLQ3ZCN5 2332 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 TRIM66O15016 1216 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 STAU1O95793 577 aaKnown RBP23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 NR3C1P04150 777 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 MYL1P05976 194 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 USP17L7P0C7H9 530 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 NRLP54845 237 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 FAM160A1Q05DH4 1040 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 ZNF268Q14587 947 aaPredicted RBP23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 KCNB1Q14721 858 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 SCARA5Q6ZMJ2 495 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 DENND5BQ6ZUT9 1274 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 SPEM1Q8N4L4 309 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 DCLK2Q8N568 766 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 ARL14EPQ8N8R7 260 aaPredicted RBP23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 PARD3BQ8TEW8 1205 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 CCDC47Q96A33 483 aaKnown RBP23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 XYLT2Q9H1B5 865 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 KCTD10Q9H3F6 313 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 SMYD3Q9H7B4 428 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 DMAC2Q9NW81 257 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 NCDNQ9UBB6 729 aa23.69■■□□□ 1.38
GPCPD1-206ENST00000481690 C2orf78A6NCI8 922 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 F8VP50 259 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 LILRB5O75023 590 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 TDGF1P13385 188 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 ARSAP15289 507 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 PTPN1P18031 435 aaKnown RBP23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 AP3M2P53677 418 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 NCOA4Q13772 614 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 MTF1Q14872 753 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 CEP135Q66GS9 1140 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 MAMSTRQ6ZN01 415 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 SLC9A9Q8IVB4 645 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 ELMO3Q96BJ8 720 aa23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 SCAND2PQ9GZW5 306 aaPredicted RBP23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 SMG5Q9UPR3 1016 aaKnown RBP23.68■■□□□ 1.38
GPCPD1-206ENST00000481690 PDXKO00764 312 aa23.67■■□□□ 1.38
GPCPD1-206ENST00000481690 CALUO43852 315 aaPredicted RBP23.67■■□□□ 1.38
GPCPD1-206ENST00000481690 FAM163BP0C2L3 166 aa23.67■■□□□ 1.38
GPCPD1-206ENST00000481690 RAP1GAPP47736 663 aa23.67■■□□□ 1.38
GPCPD1-206ENST00000481690 USP46P62068 366 aa23.67■■□□□ 1.38
GPCPD1-206ENST00000481690 ZNF667Q5HYK9 610 aa23.67■■□□□ 1.38
GPCPD1-206ENST00000481690 B3GALNT2Q8NCR0 500 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms