RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 TBCCD1Q9NVR7 557 aa10.4□□□□□ -0.74
CUL3-209ENST00000481135 NDRG4Q9ULP0 352 aaKnown RBP10.4□□□□□ -0.74
CUL3-209ENST00000481135 PIAS2O75928 621 aa10.39□□□□□ -0.75
CUL3-209ENST00000481135 FCRL6Q6DN72 434 aa10.39□□□□□ -0.75
CUL3-209ENST00000481135 TSHZ1Q6ZSZ6 1077 aa10.39□□□□□ -0.75
CUL3-209ENST00000481135 KRT73Q86Y46 540 aa10.39□□□□□ -0.75
CUL3-209ENST00000481135 SLC15A3Q8IY34 581 aa10.39□□□□□ -0.75
CUL3-209ENST00000481135 HAS1Q92839 578 aa10.39□□□□□ -0.75
CUL3-209ENST00000481135 MUL1Q969V5 352 aa10.39□□□□□ -0.75
CUL3-209ENST00000481135 FAM136AQ96C01 138 aa10.39□□□□□ -0.75
CUL3-209ENST00000481135 DKK4Q9UBT3 224 aa10.39□□□□□ -0.75
CUL3-209ENST00000481135 SLC39A10Q9ULF5 831 aa10.39□□□□□ -0.75
CUL3-209ENST00000481135 hCG_1984214I3L0E3 225 aa10.38□□□□□ -0.75
CUL3-209ENST00000481135 PODXLO00592 558 aa10.38□□□□□ -0.75
CUL3-209ENST00000481135 RRP9O43818 475 aaKnown RBP10.38□□□□□ -0.75
CUL3-209ENST00000481135 KCNA3P22001 575 aa10.38□□□□□ -0.75
CUL3-209ENST00000481135 TRIM14Q14142 442 aa10.38□□□□□ -0.75
CUL3-209ENST00000481135 DHX8Q14562 1220 aaKnown RBP10.38□□□□□ -0.75
CUL3-209ENST00000481135 PRR16Q569H4 304 aa10.38□□□□□ -0.75
CUL3-209ENST00000481135 RGS7BPQ6MZT1 257 aaPredicted RBP10.38□□□□□ -0.75
CUL3-209ENST00000481135 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.38□□□□□ -0.75
CUL3-209ENST00000481135 FUBP1Q96AE4 644 aaKnown RBP10.38□□□□□ -0.75
CUL3-209ENST00000481135 LENG9Q96B70 501 aa10.38□□□□□ -0.75
CUL3-209ENST00000481135 ADAM2Q99965 735 aa10.38□□□□□ -0.75
CUL3-209ENST00000481135 TPSD1Q9BZJ3 242 aa10.38□□□□□ -0.75
CUL3-209ENST00000481135 ZCWPW1Q9H0M4 648 aa10.38□□□□□ -0.75
CUL3-209ENST00000481135 DNMT3BQ9UBC3 853 aaKnown RBP10.38□□□□□ -0.75
CUL3-209ENST00000481135 MRPS17Q9Y2R5 130 aaKnown RBP10.38□□□□□ -0.75
CUL3-209ENST00000481135 hCG_1642624A0A1W2PR95 340 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 GOLGA6L3A6NEY3 463 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 C1SP09871 688 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 NR4A1P22736 598 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 GATA3P23771 443 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 PRKAR1BP31321 381 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 ALDH9A1P49189 494 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 ZNF750Q32MQ0 723 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 ZIK1Q3SY52 487 aaPredicted RBP10.37□□□□□ -0.75
CUL3-209ENST00000481135 ANO1Q5XXA6 986 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 ERAP2Q6P179 960 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 ARHGEF19Q8IW93 802 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 B3GALNT2Q8NCR0 500 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 CACTINQ8WUQ7 758 aaKnown RBP10.37□□□□□ -0.75
CUL3-209ENST00000481135 ZNF668Q96K58 619 aaPredicted RBP10.37□□□□□ -0.75
CUL3-209ENST00000481135 CXorf36Q9H7Y0 433 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 PPCSQ9HAB8 311 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 NECTIN3Q9NQS3 549 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 DKK2Q9UBU2 259 aa10.37□□□□□ -0.75
CUL3-209ENST00000481135 UNC119BA6NIH7 251 aa10.36□□□□□ -0.75
CUL3-209ENST00000481135 SKAP2O75563 359 aaPredicted RBP10.36□□□□□ -0.75
CUL3-209ENST00000481135 SPDEFO95238 335 aa10.36□□□□□ -0.75
CUL3-209ENST00000481135 ITGA8P53708 1063 aa10.36□□□□□ -0.75
CUL3-209ENST00000481135 FSTL1Q12841 308 aa10.36□□□□□ -0.75
CUL3-209ENST00000481135 PUM3Q15397 648 aaKnown RBP10.36□□□□□ -0.75
CUL3-209ENST00000481135 ZNF384Q8TF68 577 aa10.36□□□□□ -0.75
CUL3-209ENST00000481135 PTCD3Q96EY7 689 aaKnown RBP10.36□□□□□ -0.75
CUL3-209ENST00000481135 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.36□□□□□ -0.75
CUL3-209ENST00000481135 NRDE2Q9H7Z3 1164 aa10.36□□□□□ -0.75
CUL3-209ENST00000481135 TESQ9UGI8 421 aaKnown RBP10.36□□□□□ -0.75
CUL3-209ENST00000481135 FAM234BA2RU67 622 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 KCNQ3O43525 872 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 SRGAP2O75044 1071 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 NDST3O95803 873 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 PDE6CP51160 858 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 TUBA3CQ13748 450 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 BLMHQ13867 455 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 ELF2Q15723 593 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 CERCAMQ5T4B2 595 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 TUBA3EQ6PEY2 450 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 FAM109AQ8N4B1 249 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 LTV1Q96GA3 475 aaPredicted RBP10.35□□□□□ -0.75
CUL3-209ENST00000481135 HERPUD2Q9BSE4 406 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 TRIM5Q9C035 493 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 AMBRA1Q9C0C7 1298 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 ZBTB26Q9HCK0 441 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 RGL1Q9NZL6 768 aa10.35□□□□□ -0.75
CUL3-209ENST00000481135 COQ9O75208 318 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 SRGNP10124 158 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 ZFP36P26651 326 aaKnown RBP10.34□□□□□ -0.75
CUL3-209ENST00000481135 GABRB3P28472 473 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 ITIH3Q06033 890 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 CCNIQ14094 377 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 LY6G5CQ5SRR4 150 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 VPS53Q5VIR6 699 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 ARL6IP4Q66PJ3 421 aaKnown RBP10.34□□□□□ -0.75
CUL3-209ENST00000481135 KCNV1Q6PIU1 500 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 KCTD20Q7Z5Y7 419 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 GDF15Q99988 308 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 ACTRT3Q9BYD9 372 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 SERTAD3Q9UJW9 196 aa10.34□□□□□ -0.75
CUL3-209ENST00000481135 NXPH1P58417 271 aa10.33□□□□□ -0.76
CUL3-209ENST00000481135 FOXE3Q13461 319 aa10.33□□□□□ -0.76
CUL3-209ENST00000481135 TP53BP2Q13625 1128 aa10.33□□□□□ -0.76
CUL3-209ENST00000481135 CCDC38Q502W7 563 aa10.33□□□□□ -0.76
CUL3-209ENST00000481135 FAXCQ5TGI0 409 aa10.33□□□□□ -0.76
CUL3-209ENST00000481135 CRTC1Q6UUV9 634 aa10.33□□□□□ -0.76
CUL3-209ENST00000481135 CERS3Q8IU89 383 aa10.33□□□□□ -0.76
CUL3-209ENST00000481135 GLIS1Q8NBF1 620 aa10.33□□□□□ -0.76
CUL3-209ENST00000481135 SLC30A5Q8TAD4 765 aa10.33□□□□□ -0.76
CUL3-209ENST00000481135 DNAJB14Q8TBM8 379 aa10.33□□□□□ -0.76
CUL3-209ENST00000481135 SH3RF3Q8TEJ3 882 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms