RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 ZBTB16Q05516 673 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 TARDBPQ13148 414 aaKnown RBP eCLIP8.69□□□□□ -1.02
LSM5-210ENST00000480956 OASLQ15646 514 aaKnown RBP8.69□□□□□ -1.02
LSM5-210ENST00000480956 CHRNA2Q15822 529 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 PLEKHS1Q5SXH7 462 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 ANO7Q6IWH7 933 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 INO80CQ6PI98 192 aaPredicted RBP8.69□□□□□ -1.02
LSM5-210ENST00000480956 KRT28Q7Z3Y7 464 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 RALYLQ86SE5 291 aaKnown RBP8.69□□□□□ -1.02
LSM5-210ENST00000480956 GLRX5Q86SX6 157 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.69□□□□□ -1.02
LSM5-210ENST00000480956 AGGF1Q8N302 714 aaeCLIP8.69□□□□□ -1.02
LSM5-210ENST00000480956 NLGN2Q8NFZ4 835 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 GPR150Q8NGU9 434 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 BRSK1Q8TDC3 778 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 ASB15Q8WXK1 588 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 RSC1A1Q92681 617 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 SYAP1Q96A49 352 aaPredicted RBP8.69□□□□□ -1.02
LSM5-210ENST00000480956 TCTN2Q96GX1 697 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 FUT8Q9BYC5 575 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 MRPL46Q9H2W6 279 aaKnown RBP8.69□□□□□ -1.02
LSM5-210ENST00000480956 OPA3Q9H6K4 179 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 JPH1Q9HDC5 661 aaPredicted RBP8.69□□□□□ -1.02
LSM5-210ENST00000480956 SNTG1Q9NSN8 517 aa8.69□□□□□ -1.02
LSM5-210ENST00000480956 ZMYND8Q9ULU4 1186 aaPredicted RBP8.69□□□□□ -1.02
LSM5-210ENST00000480956 CORO1CQ9ULV4 474 aaPredicted RBP8.69□□□□□ -1.02
LSM5-210ENST00000480956 BOLA2-SMG1P6H3BVE0 249 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 DLL1O00548 723 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 KLK10O43240 276 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 KCNQ3O43525 872 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 EXOC3O60645 756 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 KINO60870 393 aaKnown RBP8.68□□□□□ -1.02
LSM5-210ENST00000480956 TPPPO94811 219 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 ZNF205O95201 554 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 MMEP08473 750 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 DLDP09622 509 aaKnown RBP8.68□□□□□ -1.02
LSM5-210ENST00000480956 CCDC175P0C221 793 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 SLURP2P0DP57 97 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 TXNP10599 105 aaKnown RBP8.68□□□□□ -1.02
LSM5-210ENST00000480956 NFKBIAP25963 317 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 KLRC1P26715 233 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 RFC1P35251 1148 aaPredicted RBP8.68□□□□□ -1.02
LSM5-210ENST00000480956 ASPAP45381 313 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 PSMC6P62333 389 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 SLC6A3Q01959 620 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 MORF4L2Q15014 288 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 SMU1Q2TAY7 513 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 ZNF805Q5CZA5 627 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 ERMARDQ5T6L9 678 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 FAXCQ5TGI0 409 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 BTBD8Q5XKL5 378 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 TMEM132EQ6IEE7 984 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 SLFN12LQ6IEE8 588 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 KIAA0408Q6ZU52 694 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 CCDC186Q7Z3E2 898 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 KRT73Q86Y46 540 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 Q8N1Y9 231 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 TDRD5Q8NAT2 981 aaKnown RBP8.68□□□□□ -1.02
LSM5-210ENST00000480956 HIPK4Q8NE63 616 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 IL17RDQ8NFM7 739 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 TMX3Q96JJ7 454 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 TMPRSS13Q9BYE2 586 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 DNAJB9Q9UBS3 223 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 KIF3AQ9Y496 699 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 CPA1P15085 419 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 LMAN1P49257 510 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 SLC12A3P55017 1021 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 YBEYP58557 167 aaPredicted RBP8.68□□□□□ -1.02
LSM5-210ENST00000480956 TLE1Q04724 770 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 MYO1EQ12965 1108 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 RPS6KA2Q15349 733 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 FAM83HQ6ZRV2 1179 aaPredicted RBP8.68□□□□□ -1.02
LSM5-210ENST00000480956 WDTC1Q8N5D0 677 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 DCBLD1Q8N8Z6 715 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 CHST13Q8NET6 341 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 GIMAP1Q8WWP7 306 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 RMDN1Q96DB5 314 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 BRD8Q9H0E9 1235 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 VEZTQ9HBM0 779 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 KLHL20Q9Y2M5 609 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 PCDHB6Q9Y5E3 794 aa8.68□□□□□ -1.02
LSM5-210ENST00000480956 MBD3L4A6NDZ8 208 aaPredicted RBP8.67□□□□□ -1.02
LSM5-210ENST00000480956 MBD3L3A6NE82 208 aaPredicted RBP8.67□□□□□ -1.02
LSM5-210ENST00000480956 NUDT19A8MXV4 375 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 ABHD16AO95870 558 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 HEXBP07686 556 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 PTPN2P17706 415 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 PRDX5P30044 214 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 CD68P34810 354 aaPredicted RBP8.67□□□□□ -1.02
LSM5-210ENST00000480956 PSMC4P43686 418 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 CAPZA2P47755 286 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 TRPC1P48995 793 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 GPC3P51654 580 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 EXOSC9Q06265 439 aaKnown RBP8.67□□□□□ -1.02
LSM5-210ENST00000480956 CBX3Q13185 183 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 CTBP1Q13363 440 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 TNFAIP1Q13829 316 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 RABEP1Q15276 862 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 NFIL3Q16649 462 aa8.67□□□□□ -1.02
LSM5-210ENST00000480956 PRICKLE4Q2TBC4 344 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms