RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 PAQR9Q6ZVX9 377 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 PDZD4Q76G19 769 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-213ENST00000480539 APTXQ7Z2E3 356 aaKnown RBP16.08■□□□□ 0.16
ABCF3-213ENST00000480539 ITIH5Q86UX2 942 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 TDRD5Q8NAT2 981 aaKnown RBP16.08■□□□□ 0.16
ABCF3-213ENST00000480539 RBBP8NLQ8NC74 664 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-213ENST00000480539 ITFG1Q8TB96 612 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 SMARCD1Q96GM5 515 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 HEXIM2Q96MH2 286 aaKnown RBP16.08■□□□□ 0.16
ABCF3-213ENST00000480539 UHRF1Q96T88 793 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-213ENST00000480539 DNAI2Q9GZS0 605 aa16.08■□□□□ 0.16
ABCF3-213ENST00000480539 FAM124BQ9H5Z6 455 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-213ENST00000480539 MAGED2Q9UNF1 606 aaPredicted RBP16.08■□□□□ 0.16
ABCF3-213ENST00000480539 TRIM66O15016 1216 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 KRT5P13647 590 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 CD19P15391 556 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 ANXA13P27216 316 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 GBP2P32456 591 aaPredicted RBP16.07■□□□□ 0.16
ABCF3-213ENST00000480539 MFAP3P55082 362 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 KCNMA1Q12791 1236 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 TAF12Q16514 161 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 PPP1R26Q5T8A7 1209 aaPredicted RBP16.07■□□□□ 0.16
ABCF3-213ENST00000480539 JAKMIP2Q96AA8 810 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 MYADMQ96S97 322 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 DMAP1Q9NPF5 467 aaPredicted RBP16.07■□□□□ 0.16
ABCF3-213ENST00000480539 PRKAG3Q9UGI9 489 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 NR2E1Q9Y466 385 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 ASB3Q9Y575 518 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 FHOD1Q9Y613 1164 aa16.07■□□□□ 0.16
ABCF3-213ENST00000480539 SLC38A8A6NNN8 435 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 GOLGA6L19H0YKK7 550 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 CAVIN2O95810 425 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 FAM200BP0CF97 657 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 PNMA6AP0CW24 399 aaPredicted RBP16.06■□□□□ 0.16
ABCF3-213ENST00000480539 GJA1P17302 382 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 SSTR3P32745 418 aaPredicted RBP16.06■□□□□ 0.16
ABCF3-213ENST00000480539 TPM4P67936 248 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 UBXN1Q04323 297 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 GOLGA7BQ2TAP0 167 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 PRSS36Q5K4E3 855 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 CYP4A22Q5TCH4 519 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 ENOSF1Q7L5Y1 443 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 DNAJB7Q7Z6W7 309 aaPredicted RBP16.06■□□□□ 0.16
ABCF3-213ENST00000480539 CYFIP2Q96F07 1278 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 SMOQ99835 787 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 LRRC3Q9BY71 257 aa16.06■□□□□ 0.16
ABCF3-213ENST00000480539 MRPS23Q9Y3D9 190 aaKnown RBP16.06■□□□□ 0.16
ABCF3-213ENST00000480539 A0A1W2PRU2 124 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 LOC730098B7Z3J9 87 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 RNF225M0QZC1 329 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-213ENST00000480539 BEST1O76090 585 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 CSH1P0DML2 217 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 CSH2P0DML3 217 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 HMGA1P17096 107 aaKnown RBP16.05■□□□□ 0.16
ABCF3-213ENST00000480539 BRD2P25440 801 aaKnown RBP16.05■□□□□ 0.16
ABCF3-213ENST00000480539 USP8P40818 1118 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 ZNF132P52740 706 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 EPHA5P54756 1037 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 MAP3K7CLP57077 242 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 CYP4F8P98187 520 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 IFRD2Q12894 506 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-213ENST00000480539 RAPGEF1Q13905 1077 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 SYCP1Q15431 976 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 PTPN21Q16825 1174 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 SGO2Q562F6 1265 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 KLHDC7AQ5VTJ3 777 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 DPY19L2P1Q6NXN4 242 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 OTOP3Q7RTS5 596 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 NPAS3Q8IXF0 933 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 RNF214Q8ND24 703 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 SHKBP1Q8TBC3 707 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 C8orf48Q96LL4 319 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 PCMTD1Q96MG8 357 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-213ENST00000480539 KCNK16Q96T55 309 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 HNRNPABQ99729 332 aaKnown RBP16.05■□□□□ 0.16
ABCF3-213ENST00000480539 GANQ9H2C0 597 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 FAM207AQ9NSI2 230 aaPredicted RBP16.05■□□□□ 0.16
ABCF3-213ENST00000480539 DNAJC12Q9UKB3 198 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 SIK3Q9Y2K2 1263 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 NOTCH4Q99466 2003 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 PATJQ8NI35 1801 aa16.05■□□□□ 0.16
ABCF3-213ENST00000480539 DOCK6Q96HP0 2047 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 VCANP13611 3396 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 MOSPD3O75425 235 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 NOL4O94818 638 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 PAEPP09466 180 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 GABRR2P28476 465 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 USP46P62068 366 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 TEAD2Q15562 447 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 STXBP5Q5T5C0 1151 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 ARHGAP17Q68EM7 881 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 CLEC20AQ6ZU45 233 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 GAREM2Q75VX8 874 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 LEMD2Q8NC56 503 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 ZMIZ2Q8NF64 920 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 ST13P5Q8NFI4 369 aaPredicted RBP16.04■□□□□ 0.16
ABCF3-213ENST00000480539 TFAP2BQ92481 460 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 SHC3Q92529 594 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 FGF13Q92913 245 aa16.04■□□□□ 0.16
ABCF3-213ENST00000480539 ACSF2Q96CM8 615 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms