RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 ZNF638Q14966 1978 aaKnown RBP12.92□□□□□ -0.34
USP11-208ENST00000480104 A0A1B0GVT2 93 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 GOLGA8AA7E2F4 631 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 GOLGA8BA8MQT2 603 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 CCER2I3L3R5 266 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 BCAT2O15382 392 aaPredicted RBP12.92□□□□□ -0.34
USP11-208ENST00000480104 ZBTB43O43298 467 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 USO1O60763 962 aaKnown RBP12.92□□□□□ -0.34
USP11-208ENST00000480104 APODP05090 189 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 CYP17A1P05093 508 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 HOXB2P14652 356 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 KCNE1P15382 129 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 HSPA4P34932 840 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 TUFMP49411 452 aaKnown RBP12.92□□□□□ -0.34
USP11-208ENST00000480104 KDSRQ06136 332 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 EPHA7Q15375 998 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 SF3A1Q15459 793 aaKnown RBP12.92□□□□□ -0.34
USP11-208ENST00000480104 MAEAQ7L5Y9 396 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 USP37Q86T82 979 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 C12orf40Q86WS4 652 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 STKLD1Q8NE28 680 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 SH3RF2Q8TEC5 729 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 PSMG3-AS1Q96PY0 264 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 PNKPQ96T60 521 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.92□□□□□ -0.34
USP11-208ENST00000480104 C2orf40Q9H1Z8 148 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 OSBPL3Q9H4L5 887 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 TRPC7Q9HCX4 862 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 DDX25Q9UHL0 483 aaKnown RBP12.92□□□□□ -0.34
USP11-208ENST00000480104 RCAN3Q9UKA8 241 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 BRPF3Q9ULD4 1205 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 MAN2B2Q9Y2E5 1009 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 PCDHGA1Q9Y5H4 931 aa12.92□□□□□ -0.34
USP11-208ENST00000480104 FBN3Q75N90 2809 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 A0A1W2PQF6 199 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 MYMKA6NI61 221 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 TADA3O75528 432 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 RFPL3O75679 317 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 CKMP06732 381 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 HMGA1P17096 107 aaKnown RBP12.91□□□□□ -0.34
USP11-208ENST00000480104 GRM5P41594 1212 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 ZC2HC1CQ53FD0 456 aaPredicted RBP12.91□□□□□ -0.34
USP11-208ENST00000480104 NCAPH2Q6IBW4 605 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 TPH2Q8IWU9 490 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 EXD3Q8N9H8 876 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 BSNDQ8WZ55 320 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 HIC2Q96JB3 615 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 ZFRQ96KR1 1074 aaKnown RBP12.91□□□□□ -0.34
USP11-208ENST00000480104 CCDC43Q96MW1 224 aaKnown RBP12.91□□□□□ -0.34
USP11-208ENST00000480104 CYP2S1Q96SQ9 504 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 CCDC94Q9BW85 323 aaPredicted RBP12.91□□□□□ -0.34
USP11-208ENST00000480104 SLC6A17Q9H1V8 727 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 TMEM206Q9H813 350 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 ARHGEF4Q9NR80 690 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 TUBGCP4Q9UGJ1 667 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 NFE2L3Q9Y4A8 694 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 RBM8AQ9Y5S9 174 aaKnown RBP12.91□□□□□ -0.34
USP11-208ENST00000480104 ICE1Q9Y2F5 2266 aa12.91□□□□□ -0.34
USP11-208ENST00000480104 MYO18AQ92614 2054 aaKnown RBP12.9□□□□□ -0.34
USP11-208ENST00000480104 CELSR2Q9HCU4 2923 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 BTBD18B2RXH4 712 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 CBX4O00257 560 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 SUV39H1O43463 412 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 WASP42768 502 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 DMP1Q13316 513 aaPredicted RBP12.9□□□□□ -0.34
USP11-208ENST00000480104 SLC39A12Q504Y0 691 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 NT5DC1Q5TFE4 455 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 ATF7IP2Q5U623 682 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 OVOS1Q6IE37 1185 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 OR10T2Q8NGX3 314 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 CNTN3Q9P232 1028 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 SEPT3Q9UH03 358 aa12.9□□□□□ -0.34
USP11-208ENST00000480104 OTOGQ6ZRI0 2925 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 CLEC18AA5D8T8 446 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 ENC1O14682 589 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 KLK10O43240 276 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 USP17L7P0C7H9 530 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 NCAM1P13591 858 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 GRIA2P42262 883 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 TNFRSF4P43489 277 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 RARRES1P49788 294 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 CCT8P50990 548 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 RESTQ13127 1097 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 DNAJC3Q13217 504 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 KIF19Q2TAC6 998 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 ARMCX5Q6P1M9 558 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 FBXL19Q6PCT2 694 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 MOXD1Q6UVY6 613 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 CLEC18BQ6UXF7 455 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 DHX40Q8IX18 779 aaKnown RBP12.89□□□□□ -0.35
USP11-208ENST00000480104 CLEC18CQ8NCF0 446 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 CCDC148Q8NFR7 591 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 KIFC3Q9BVG8 833 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 CDT1Q9H211 546 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 CD248Q9HCU0 757 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 KCNMB3Q9NPA1 279 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 STARD5Q9NSY2 213 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 ANKEF1Q9NU02 776 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 VPS54Q9P1Q0 977 aa12.89□□□□□ -0.35
USP11-208ENST00000480104 MAGED2Q9UNF1 606 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms