RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 CASP10Q92851 521 aa9.3□□□□□ -0.92
TTC3-216ENST00000479930 IL17RAQ96F46 866 aa9.3□□□□□ -0.92
TTC3-216ENST00000479930 DPY30Q9C005 99 aa9.3□□□□□ -0.92
TTC3-216ENST00000479930 GNG14A0A1W2PPG7 69 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 LARGE1O95461 756 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 SLC7A2P52569 658 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 MTA1Q13330 715 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 APPBP2Q92624 585 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 ZKSCAN4Q969J2 545 aaPredicted RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 FAM81BQ96LP2 452 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 CHKAP35790 457 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 CTSOP43234 321 aaPredicted RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 DIS3L2Q8IYB7 885 aaKnown RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 CLEC4FQ8N1N0 589 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 FAM213AQ9BRX8 229 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 CHID1Q9BWS9 393 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 MIEF1Q9NQG6 463 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 SMARCAL1Q9NZC9 954 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 HSPBP1Q9NZL4 362 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 AP4E1Q9UPM8 1137 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 CCDC88BA6NC98 1476 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 F5H5T6 163 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 CALB1P05937 261 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 SLC26A3P40879 764 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 SEC13P55735 322 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 BYSLQ13895 437 aaKnown RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 CWF19L1Q69YN2 538 aaKnown RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 BLIDQ8IZY5 108 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 FAM45AQ8TCE6 357 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 CCDC17Q96LX7 622 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 RNF146Q9NTX7 359 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 ITGB1BP2Q9UKP3 347 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 MTMR6Q9Y217 621 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 TNRQ92752 1358 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 RPL9P32969 192 aaKnown RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 S100A5P33763 92 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 ACSM2AQ08AH3 577 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 UBE2SQ16763 222 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 ZNF697Q5TEC3 545 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 CDKL3Q8IVW4 592 aaPredicted RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 KLHL29Q96CT2 875 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 CEP95Q96GE4 821 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 HDHD2Q9H0R4 259 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 SPATA2Q9UM82 520 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 TMEM5Q9Y2B1 443 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 EFCAB5A4FU69 1503 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 H3BMM5 538 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 VWA5AO00534 786 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 PDCD5O14737 125 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 CLASP2O75122 1294 aaKnown RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 DNASE1L1P49184 302 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 ANKRD44Q8N8A2 993 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 ATP6V0D2Q8N8Y2 350 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 PLBD2Q8NHP8 589 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 SLC22A8Q8TCC7 542 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 VPS33AQ96AX1 596 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 THOC1Q96FV9 657 aaKnown RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 DYDC2Q96IM9 177 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 VPS28Q9UK41 221 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 NUP50Q9UKX7 468 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 PPP2R3BQ9Y5P8 575 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 NCF1BA6NI72 391 aaPredicted RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 NCF1CA8MVU1 366 aaPredicted RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 GABBR2O75899 941 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 NCF1P14598 390 aaPredicted RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 ATF4P18848 351 aaPredicted RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 CDH15P55291 814 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 POLE2P56282 527 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 RACGAP1Q9H0H5 632 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 PXMP2Q9NR77 195 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 ARHGEF38Q9NXL2 777 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 A0A088AWK7 358 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 A8MX80 341 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 KPNA3O00505 521 aaPredicted RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 ZNF10P21506 573 aaPredicted RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 MAD2L1BPQ15013 274 aaPredicted RBP9.29□□□□□ -0.92
TTC3-216ENST00000479930 CTXN3Q4LDR2 81 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 HGSNATQ68CP4 663 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 CDYL2Q8N8U2 506 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 PNMA1Q8ND90 353 aa9.29□□□□□ -0.92
TTC3-216ENST00000479930 PIPSLA2A3N6 862 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 CHP2O43745 196 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 ALDH2P05091 517 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 TYW3Q6IPR3 259 aaKnown RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 ATG9AQ7Z3C6 839 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 MSL3Q8N5Y2 521 aaKnown RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 LRRC20Q8TCA0 184 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 ARNTL2Q8WYA1 636 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 BTBD6Q96KE9 485 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 KIAA1586Q9HCI6 787 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 RNMTO43148 476 aaKnown RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 CASP14P31944 242 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 GTF2A2P52657 109 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 CDH13P55290 713 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 OTOAQ7RTW8 1153 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 SLC13A5Q86YT5 568 aaPredicted RBP9.28□□□□□ -0.92
TTC3-216ENST00000479930 GPRC5AQ8NFJ5 357 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 STAMBPL1Q96FJ0 436 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 SH3GL2Q99962 352 aa9.28□□□□□ -0.92
TTC3-216ENST00000479930 THUMPD3Q9BV44 507 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms