RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-223ENST00000479656 FAM171BQ6P995 826 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 TAS1R1Q7RTX1 841 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 NT5DC3Q86UY8 548 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 MSANTD4Q8NCY6 345 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 PSMB7Q99436 277 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.84□□□□□ -0.513e-6■■□□□ 12.8
APTX-223ENST00000479656 SLC4A5Q9BY07 1137 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 DUSP16Q9BY84 665 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 TMLHEQ9NVH6 421 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 AMFRQ9UKV5 643 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 ZMYND8Q9ULU4 1186 aaPredicted RBP11.84□□□□□ -0.51
APTX-223ENST00000479656 SAR1BQ9Y6B6 198 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 SCINQ9Y6U3 715 aa11.84□□□□□ -0.51
APTX-223ENST00000479656 MYO1FO00160 1098 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 OR4Q2P0C623 313 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 FGFR3P22607 806 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 RABGGTBP53611 331 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 PLCB3Q01970 1234 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 VARS2Q5ST30 1063 aaKnown RBP11.83□□□□□ -0.52
APTX-223ENST00000479656 OR6B2Q6IFH4 312 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 DNAJC24Q6P3W2 148 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 KCNT2Q6UVM3 1135 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 TMEM110Q86TL2 294 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 CPNE8Q86YQ8 564 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 SCUBE3Q8IX30 993 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 C3orf20Q8ND61 904 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 IPO4Q8TEX9 1081 aaKnown RBP11.83□□□□□ -0.52
APTX-223ENST00000479656 STK32AQ8WU08 396 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 MYLPFQ96A32 169 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 PKMYT1Q99640 499 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 HTATIP2Q9BUP3 242 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 SELENOOQ9BVL4 669 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 L2HGDHQ9H9P8 463 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 RC3H2Q9HBD1 1191 aaKnown RBP11.83□□□□□ -0.52
APTX-223ENST00000479656 CXXC1Q9P0U4 656 aaPredicted RBP11.83□□□□□ -0.52
APTX-223ENST00000479656 WDR35Q9P2L0 1181 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 SNX12Q9UMY4 172 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 SF3B1O75533 1304 aaKnown RBP eCLIP11.83□□□□□ -0.525e-11■■■■■ 34.5
APTX-223ENST00000479656 TMEM191CA6NGB0 347 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 SIGLEC16A6NMB1 481 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 AP1G2O75843 785 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 FAM200BP0CF97 657 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 KRT3P12035 628 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 NPR3P17342 541 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 COMTP21964 271 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 CXCR5P32302 372 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 CACNA2D1P54289 1103 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 MAP3K7CLP57077 242 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 TSPY1Q01534 308 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 MRPL58Q14197 206 aaKnown RBP11.83□□□□□ -0.52
APTX-223ENST00000479656 RPS6KA1Q15418 735 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 PPP1R15BQ5SWA1 713 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 C11orf63Q6NUN7 778 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 DCUN1D2Q6PH85 259 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 CLEC20AQ6ZU45 233 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 FAM35AQ86V20 835 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 PIGZQ86VD9 579 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 DPF3Q92784 378 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 MCRS1Q96EZ8 462 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 MCEEQ96PE7 176 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 KCNK16Q96T55 309 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 YME1L1Q96TA2 773 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 RHOBTB2Q9BYZ6 727 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 MIS12Q9H081 205 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 CDC23Q9UJX2 597 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 MRFAP1Q9Y605 127 aa11.83□□□□□ -0.52
APTX-223ENST00000479656 MRPL42Q9Y6G3 142 aaKnown RBP11.83□□□□□ -0.52
APTX-223ENST00000479656 COL4A6Q14031 1691 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 XPO1O14980 1071 aaKnown RBP11.82□□□□□ -0.52
APTX-223ENST00000479656 ZNF185O15231 689 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 LCP1P13796 627 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 PRLRP16471 622 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 BDNFP23560 247 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 RFC1P35251 1148 aaPredicted RBP11.82□□□□□ -0.52
APTX-223ENST00000479656 PLA2G4AP47712 749 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 SLC8A3P57103 927 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 ELAVL2Q12926 359 aaKnown RBP11.82□□□□□ -0.52
APTX-223ENST00000479656 CTXN3Q4LDR2 81 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 FAM183BPQ6ZVS7 135 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 CMTR2Q8IYT2 770 aaKnown RBP11.82□□□□□ -0.52
APTX-223ENST00000479656 JOSD2Q8TAC2 188 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 IGSF21Q96ID5 467 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 HSFY1Q96LI6 401 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 OSBPL9Q96SU4 736 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 SMOQ99835 787 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 ZCWPW1Q9H0M4 648 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 METTL5Q9NRN9 209 aaKnown RBP11.82□□□□□ -0.52
APTX-223ENST00000479656 KRT82Q9NSB4 513 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 TSC2P49815 1807 aa11.82□□□□□ -0.52
APTX-223ENST00000479656 PAPSS1O43252 624 aaPredicted RBP11.81□□□□□ -0.52
APTX-223ENST00000479656 RPL34P49207 117 aaKnown RBP11.81□□□□□ -0.52
APTX-223ENST00000479656 GSCP56915 257 aaPredicted RBP11.81□□□□□ -0.52
APTX-223ENST00000479656 SNX16P57768 344 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 RNASE9P60153 205 aaKnown RBP11.81□□□□□ -0.52
APTX-223ENST00000479656 OGDHQ02218 1023 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 MAPRE1Q15691 268 aaKnown RBP11.81□□□□□ -0.52
APTX-223ENST00000479656 SLC39A12Q504Y0 691 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 RTP2Q5QGT7 225 aa11.81□□□□□ -0.52
APTX-223ENST00000479656 FAM102AQ5T9C2 384 aaPredicted RBP11.81□□□□□ -0.52
APTX-223ENST00000479656 EMC1Q8N766 993 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms