RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 AKAP3O75969 853 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 CAPNS1P04632 268 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 CCDC192P0DO97 292 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 CXCL8P10145 99 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 ODC1P11926 461 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 IDEP14735 1019 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 CYP3A5P20815 502 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 GABRR2P28476 465 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 LRPAP1P30533 357 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 EPHB3P54753 998 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 YWHAHQ04917 246 aaPredicted RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 RING1Q06587 406 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 PLD1Q13393 1074 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 TMEM132DQ14C87 1099 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 DYMQ7RTS9 669 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 CCDC65Q8IXS2 484 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 THEM5Q8N1Q8 247 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 STKLD1Q8NE28 680 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 NOC3LQ8WTT2 800 aaKnown RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 POMGNT1Q8WZA1 660 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 USP13Q92995 863 aaPredicted RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 SYAP1Q96A49 352 aaPredicted RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 TIGD1Q96MW7 591 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 ACCSQ96QU6 501 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 SCNM1Q9BWG6 230 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 EBF3Q9H4W6 596 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 TASP1Q9H6P5 420 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 MRPL44Q9H9J2 332 aaKnown RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 CGNQ9P2M7 1197 aaKnown RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 AGO2Q9UKV8 859 aaKnown RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 INVSQ9Y283 1065 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 DERAQ9Y315 318 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 SRPRBQ9Y5M8 271 aaKnown RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 DENND4CQ5VZ89 1909 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 NUP205Q92621 2012 aa7.16□□□□□ -1.26
VCP-205ENST00000479300 ASCC3Q8N3C0 2202 aaKnown RBP7.16□□□□□ -1.26
VCP-205ENST00000479300 PTPRDP23468 1912 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 TTC26A0AVF1 554 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 OR6C75A6NL08 312 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 LACTBL1A8MY62 500 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 TULP2O00295 520 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 IL18RAPO95256 599 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 GCNT3O95395 438 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 CAVIN2O95810 425 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 LDHAP00338 332 aaKnown RBP7.15□□□□□ -1.26
VCP-205ENST00000479300 PIGRP01833 764 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 HMGA1P17096 107 aaKnown RBP7.15□□□□□ -1.26
VCP-205ENST00000479300 BCKDHBP21953 392 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 NMT1P30419 496 aaKnown RBP7.15□□□□□ -1.26
VCP-205ENST00000479300 TNFSF9P41273 254 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 ALDH1A3P47895 512 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 GALK1P51570 392 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 CLCN6P51797 869 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 ZNF131P52739 623 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 GTF2BQ00403 316 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 AMPD3Q01432 767 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 CREB5Q02930 508 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 RESTQ13127 1097 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 ALCAMQ13740 583 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 RUNX3Q13761 415 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 TAF12Q16514 161 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 KIAA1211LQ6NV74 962 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 LRRTM3Q86VH5 581 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 CAMKK1Q8N5S9 505 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 FAM200AQ8TCP9 573 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 CACTINQ8WUQ7 758 aaKnown RBP7.15□□□□□ -1.26
VCP-205ENST00000479300 EPSTI1Q96J88 318 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 TSPY26PQ9H489 355 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 ASB7Q9H672 318 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 YY1AP1Q9H869 796 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 BLOC1S4Q9NUP1 217 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 FBXO2Q9UK22 296 aaPredicted RBP7.15□□□□□ -1.26
VCP-205ENST00000479300 KLK13Q9UKR3 277 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 DSEQ9UL01 958 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 SLC8A2Q9UPR5 921 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 ASB3Q9Y575 518 aa7.15□□□□□ -1.26
VCP-205ENST00000479300 TNRC6BQ9UPQ9 1833 aaKnown RBP7.15□□□□□ -1.27
VCP-205ENST00000479300 TCHHQ07283 1943 aa7.15□□□□□ -1.27
VCP-205ENST00000479300 A0A0B4J269 797 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 HYAL3O43820 417 aaPredicted RBP7.14□□□□□ -1.27
VCP-205ENST00000479300 FLNBO75369 2602 aaKnown RBP7.14□□□□□ -1.27
VCP-205ENST00000479300 TADA3O75528 432 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 FGF19O95750 216 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 F11P03951 625 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 HNRNPLP14866 589 aaKnown RBP eCLIP7.14□□□□□ -1.27
VCP-205ENST00000479300 TYMPP19971 482 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 CSRP1P21291 193 aaKnown RBP7.14□□□□□ -1.27
VCP-205ENST00000479300 GJA4P35212 333 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 GPR15P49685 360 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 IRX4P78413 519 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 POU5F1Q01860 360 aaKnown RBP7.14□□□□□ -1.27
VCP-205ENST00000479300 GRIN1Q05586 938 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 MESP2Q0VG99 397 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 GRSF1Q12849 480 aaKnown RBP eCLIP7.14□□□□□ -1.27
VCP-205ENST00000479300 MYBPC2Q14324 1141 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 VEPH1Q14D04 833 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 SLC39A14Q15043 492 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 PTPAQ15257 358 aa7.14□□□□□ -1.27
VCP-205ENST00000479300 ENOX2Q16206 610 aaKnown RBP7.14□□□□□ -1.27
VCP-205ENST00000479300 GAB4Q2WGN9 574 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms