RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 GCSHP23434 173 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 AGFG1P52594 562 aaKnown RBP6.23□□□□□ -1.41
CCDC171-207ENST00000478913 KRTAP1-1Q07627 177 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 FGL2Q14314 439 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 LLGL1Q15334 1064 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 CCDC181Q5TID7 509 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 AGAP9Q5VTM2 703 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 TSHZ3Q63HK5 1081 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 OR56A1Q8NGH5 318 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 NUP133Q8WUM0 1156 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 NEU1Q99519 415 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 ZNF703Q9H7S9 590 aaPredicted RBP6.23□□□□□ -1.41
CCDC171-207ENST00000478913 RLIMQ9NVW2 624 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 CEP72Q9P209 647 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 SLC45A2Q9UMX9 530 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 CHST2Q9Y4C5 530 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 LMO7Q8WWI1 1683 aa6.23□□□□□ -1.41
CCDC171-207ENST00000478913 KIF13BQ9NQT8 1826 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 BRCA1P38398 1863 aaKnown RBP6.22□□□□□ -1.41
CCDC171-207ENST00000478913 CAPN8A6NHC0 703 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 A6NNZ2 444 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 C1QTNF3-AMACRE9PGA6 284 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 ZNF185O15231 689 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 RPS6KA4O75676 772 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 ANXA1P04083 346 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 GJB1P08034 283 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 PTTG1IPP53801 180 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 PSMC1P62191 440 aaKnown RBP6.22□□□□□ -1.41
CCDC171-207ENST00000478913 NOMO3P69849 1222 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 PDCD4Q53EL6 469 aaKnown RBP6.22□□□□□ -1.41
CCDC171-207ENST00000478913 NOMO2Q5JPE7 1267 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 KHDC1LQ5JSQ8 128 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 METRNLQ641Q3 311 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 CCDC149Q6ZUS6 474 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 SRGAP1Q7Z6B7 1085 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 PDSS2Q86YH6 399 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 ZFPM1Q8IX07 1006 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 PPM1EQ8WY54 764 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 TIFAQ96CG3 184 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 ZNF333Q96JL9 665 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 PLEKHG4BQ96PX9 1271 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 R3HDMLQ9H3Y0 253 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 RNPEPQ9H4A4 650 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 KLHL11Q9NVR0 708 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 CPA4Q9UI42 421 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 ZDHHC8Q9ULC8 765 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 USP54Q70EL1 1684 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 ITSN1Q15811 1721 aa6.22□□□□□ -1.41
CCDC171-207ENST00000478913 ADAMTSL1Q8N6G6 1762 aa6.21□□□□□ -1.41
CCDC171-207ENST00000478913 ZNF785A8K8V0 405 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 AHRRA9YTQ3 701 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 TPP1O14773 563 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 MATN4O95460 622 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 AHSGP02765 367 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 C1SP09871 688 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 RARBP10826 455 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 EPS15P42566 896 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 PHKA1P46020 1223 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 GPSM2P81274 684 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 DLK2Q6UY11 383 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 CHST15Q7LFX5 561 aaPredicted RBP6.21□□□□□ -1.42
CCDC171-207ENST00000478913 GGNQ86UU5 652 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 KIAA0319LQ8IZA0 1049 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 TMIEQ8NEW7 156 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 SLC46A2Q9BY10 475 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 TAOK3Q9H2K8 898 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 PCDHA6Q9UN73 950 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 PPIP5K1Q6PFW1 1433 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 USP34Q70CQ2 3546 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 RGPD8O14715 1765 aaPredicted RBP6.21□□□□□ -1.42
CCDC171-207ENST00000478913 SCN11AQ9UI33 1791 aa6.21□□□□□ -1.42
CCDC171-207ENST00000478913 ZNF292O60281 2723 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 NSD2O96028 1365 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 A0A1W2PPL8 197 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 RNASET2O00584 256 aaKnown RBP6.2□□□□□ -1.42
CCDC171-207ENST00000478913 PRC1O43663 620 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 ZBED1O96006 694 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 GNAI2P04899 355 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 FCER1AP12319 257 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 CACNB3P54284 484 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 USP14P54578 494 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 MRPS5P82675 430 aaKnown RBP6.2□□□□□ -1.42
CCDC171-207ENST00000478913 EXOSC9Q06265 439 aaKnown RBP6.2□□□□□ -1.42
CCDC171-207ENST00000478913 SLFN5Q08AF3 891 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 KIF22Q14807 665 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 CNN3Q15417 329 aaKnown RBP6.2□□□□□ -1.42
CCDC171-207ENST00000478913 ST3GAL2Q16842 350 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 MAEAQ7L5Y9 396 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 SPRED1Q7Z699 444 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 ZNF276Q8N554 614 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 FAM156AQ8NDB6 213 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 MARS2Q96GW9 593 aaKnown RBP6.2□□□□□ -1.42
CCDC171-207ENST00000478913 KLHL32Q96NJ5 620 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 NT5C1BQ96P26 610 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 PNKPQ96T60 521 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 ZSWIM1Q9BR11 485 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 TEX101Q9BY14 249 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 IMPG2Q9BZV3 1241 aa6.2□□□□□ -1.42
CCDC171-207ENST00000478913 ZNF768Q9H5H4 540 aaKnown RBP6.2□□□□□ -1.42
CCDC171-207ENST00000478913 ZMAT3Q9HA38 289 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms