RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 ZNF512Q96ME7 567 aaPredicted RBP28.46■■■□□ 2.15
CCM2-211ENST00000478582 AVENQ9NQS1 362 aaPredicted RBP28.46■■■□□ 2.15
CCM2-211ENST00000478582 DNMT3BQ9UBC3 853 aaKnown RBP28.46■■■□□ 2.15
CCM2-211ENST00000478582 CNTN6Q9UQ52 1028 aa28.46■■■□□ 2.15
CCM2-211ENST00000478582 SOAT2O75908 522 aa28.45■■■□□ 2.14
CCM2-211ENST00000478582 ATF6P18850 670 aa28.45■■■□□ 2.14
CCM2-211ENST00000478582 BDNFP23560 247 aa28.45■■■□□ 2.14
CCM2-211ENST00000478582 ZNF394Q53GI3 561 aa28.45■■■□□ 2.14
CCM2-211ENST00000478582 PAQR9Q6ZVX9 377 aa28.45■■■□□ 2.14
CCM2-211ENST00000478582 BMP8AQ7Z5Y6 402 aa28.45■■■□□ 2.14
CCM2-211ENST00000478582 FUKQ8N0W3 1084 aa28.45■■■□□ 2.14
CCM2-211ENST00000478582 C12orf29Q8N999 325 aa28.45■■■□□ 2.14
CCM2-211ENST00000478582 CEP295NLQ96MC4 621 aa28.45■■■□□ 2.14
CCM2-211ENST00000478582 TMEM221A6NGB7 291 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 M0R296 226 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 ASGR2P07307 311 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 GBP2P32456 591 aaPredicted RBP28.44■■■□□ 2.14
CCM2-211ENST00000478582 APBA1Q02410 837 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 IQCEQ6IPM2 695 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 HFE2Q6ZVN8 426 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 GRASPQ7Z6J2 395 aaPredicted RBP28.44■■■□□ 2.14
CCM2-211ENST00000478582 PSMG2Q969U7 264 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 HEXIM2Q96MH2 286 aaKnown RBP28.44■■■□□ 2.14
CCM2-211ENST00000478582 HNRNPABQ99729 332 aaKnown RBP28.44■■■□□ 2.14
CCM2-211ENST00000478582 ZNF518BQ9C0D4 1074 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 PLCB1Q9NQ66 1216 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 RAPGEFL1Q9UHV5 662 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 KIAA1257Q9ULG3 409 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 PCDHB4Q9Y5E5 795 aa28.44■■■□□ 2.14
CCM2-211ENST00000478582 ATP8B3O60423 1300 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 GOLGA6L19H0YKK7 550 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 EPHA5P54756 1037 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 MTMR3Q13615 1198 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 VEPH1Q14D04 833 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 GJB7Q6PEY0 223 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 ITIH5Q86UX2 942 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 FAM35AQ86V20 835 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 UBALD2Q8IYN6 164 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 CYFIP2Q96F07 1278 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 C8orf48Q96LL4 319 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 ERGIC2Q96RQ1 377 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 HCFC1R1Q9NWW0 138 aa28.43■■■□□ 2.14
CCM2-211ENST00000478582 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28.43■■■□□ 2.141e-8■■□□□ 13.3
CCM2-211ENST00000478582 CLDN5O00501 218 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 PAEPP09466 180 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 CCDC130P13994 396 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 DDR2Q16832 855 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 KLHDC7AQ5VTJ3 777 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 ARHGAP17Q68EM7 881 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 TMEM270Q6UE05 265 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 DNAJB7Q7Z6W7 309 aaPredicted RBP28.42■■■□□ 2.14
CCM2-211ENST00000478582 LEMD2Q8NC56 503 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 SLC2A14Q8TDB8 520 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 SPATA17Q96L03 361 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 MYADMQ96S97 322 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 MED10Q9BTT4 135 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 LRRC3Q9BY71 257 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 RTN4Q9NQC3 1192 aaKnown RBP28.42■■■□□ 2.14
CCM2-211ENST00000478582 SIK3Q9Y2K2 1263 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 DOCK6Q96HP0 2047 aa28.42■■■□□ 2.14
CCM2-211ENST00000478582 RNF225M0QZC1 329 aaPredicted RBP28.41■■■□□ 2.14
CCM2-211ENST00000478582 TRIM66O15016 1216 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 RHOP08100 348 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 RFX1P22670 979 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 GRIK1P39086 918 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 GPR15P49685 360 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 ZNF132P52740 706 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 UBXN1Q04323 297 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 PABPC1LQ4VXU2 614 aaKnown RBP28.41■■■□□ 2.14
CCM2-211ENST00000478582 SCN4BQ8IWT1 228 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 ASIC4Q96FT7 647 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 SMARCD1Q96GM5 515 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 CORO1BQ9BR76 489 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 LSM14BQ9BX40 385 aaKnown RBP28.41■■■□□ 2.14
CCM2-211ENST00000478582 FAM49BQ9NUQ9 324 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 EPS15L1Q9UBC2 864 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 DNAJC12Q9UKB3 198 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 HCN4Q9Y3Q4 1203 aa28.41■■■□□ 2.14
CCM2-211ENST00000478582 TRIOO75962 3097 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 PTPRDP23468 1912 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 CSH1P0DML2 217 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 CSH2P0DML3 217 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 FSHRP23945 695 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 NTHL1P78549 312 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 FILIP1LQ4L180 1135 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 RBBP8NLQ8NC74 664 aaPredicted RBP28.4■■■□□ 2.14
CCM2-211ENST00000478582 SHC3Q92529 594 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 PBXIP1Q96AQ6 731 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 KCNK12Q9HB15 430 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 CSNK1G1Q9HCP0 422 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 TMEM30AQ9NV96 361 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 IGSF9Q9P2J2 1179 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 DAAM1Q9Y4D1 1078 aa28.4■■■□□ 2.14
CCM2-211ENST00000478582 DOCK8Q8NF50 2099 aa28.39■■■□□ 2.14
CCM2-211ENST00000478582 A0A1B0GTH6 734 aa28.39■■■□□ 2.14
CCM2-211ENST00000478582 MICAL2O94851 1124 aa28.39■■■□□ 2.14
CCM2-211ENST00000478582 VDRP11473 427 aa28.39■■■□□ 2.14
CCM2-211ENST00000478582 CACNA2D1P54289 1103 aa28.39■■■□□ 2.14
CCM2-211ENST00000478582 PPP1R26Q5T8A7 1209 aaPredicted RBP28.39■■■□□ 2.14
CCM2-211ENST00000478582 TMC8Q8IU68 726 aa28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms