RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 POLHQ9Y253 713 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 ERC2O15083 957 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 ARIH2O95376 493 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 ATXN1LP0C7T5 689 aaKnown RBP4.22□□□□□ -1.73
HPS3-205ENST00000478525 PRF1P14222 555 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 PXNP49023 591 aaPredicted RBP4.22□□□□□ -1.73
HPS3-205ENST00000478525 RENBPP51606 427 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 KRT85P78386 507 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 HTRA4P83105 476 aaPredicted RBP4.22□□□□□ -1.73
HPS3-205ENST00000478525 ZNF268Q14587 947 aaPredicted RBP4.22□□□□□ -1.73
HPS3-205ENST00000478525 RBMS2Q15434 407 aaKnown RBP4.22□□□□□ -1.73
HPS3-205ENST00000478525 LONRF3Q496Y0 759 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 SYDE2Q5VT97 1194 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 HEATR3Q7Z4Q2 680 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 DDX42Q86XP3 938 aaKnown RBP eCLIP4.22□□□□□ -1.73
HPS3-205ENST00000478525 CPA6Q8N4T0 437 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 TERB1Q8NA31 727 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 ABHD11Q8NFV4 315 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 MARK4Q96L34 752 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 LENG8Q96PV6 779 aaPredicted RBP4.22□□□□□ -1.73
HPS3-205ENST00000478525 SNX18Q96RF0 628 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 PTDSS2Q9BVG9 487 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 CCNL1Q9UK58 526 aaPredicted RBP4.22□□□□□ -1.73
HPS3-205ENST00000478525 TRHDEQ9UKU6 1024 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 MRFAP1Q9Y605 127 aa4.22□□□□□ -1.73
HPS3-205ENST00000478525 FAM90A10PA6NDY2 464 aa4.21□□□□□ -1.74
HPS3-205ENST00000478525 SCP2P22307 547 aa4.21□□□□□ -1.74
HPS3-205ENST00000478525 FPR3P25089 353 aa4.21□□□□□ -1.74
HPS3-205ENST00000478525 MEX3CQ5U5Q3 659 aaKnown RBP4.21□□□□□ -1.74
HPS3-205ENST00000478525 GIMAP6Q6P9H5 292 aa4.21□□□□□ -1.74
HPS3-205ENST00000478525 SERPINA13PQ6UXR4 307 aa4.21□□□□□ -1.74
HPS3-205ENST00000478525 SMRP1Q8NCR6 262 aa4.21□□□□□ -1.74
HPS3-205ENST00000478525 CIPCQ9C0C6 399 aa4.21□□□□□ -1.74
HPS3-205ENST00000478525 WWOXQ9NZC7 414 aa4.21□□□□□ -1.74
HPS3-205ENST00000478525 NDRG4Q9ULP0 352 aaKnown RBP4.21□□□□□ -1.74
HPS3-205ENST00000478525 GABRQQ9UN88 632 aa4.21□□□□□ -1.74
HPS3-205ENST00000478525 TMA7Q9Y2S6 64 aaKnown RBP4.21□□□□□ -1.74
HPS3-205ENST00000478525 SHTN1A0MZ66 631 aa4.2□□□□□ -1.74
HPS3-205ENST00000478525 UBE2Q2LH0YL09 131 aa4.2□□□□□ -1.74
HPS3-205ENST00000478525 HOXD9P28356 352 aaPredicted RBP4.2□□□□□ -1.74
HPS3-205ENST00000478525 THBS3P49746 956 aa4.2□□□□□ -1.74
HPS3-205ENST00000478525 ALDH5A1P51649 535 aaPredicted RBP4.2□□□□□ -1.74
HPS3-205ENST00000478525 HK3P52790 923 aa4.2□□□□□ -1.74
HPS3-205ENST00000478525 NANOS2P60321 138 aaKnown RBP4.2□□□□□ -1.74
HPS3-205ENST00000478525 EXOSC9Q06265 439 aaKnown RBP4.2□□□□□ -1.74
HPS3-205ENST00000478525 IQCB1Q15051 598 aa4.2□□□□□ -1.74
HPS3-205ENST00000478525 TWIST1Q15672 202 aa4.2□□□□□ -1.74
HPS3-205ENST00000478525 C10orf25Q5T742 122 aa4.2□□□□□ -1.74
HPS3-205ENST00000478525 L1TD1Q5T7N2 865 aaKnown RBP4.2□□□□□ -1.74
HPS3-205ENST00000478525 ZNF813Q6ZN06 617 aa4.2□□□□□ -1.74
HPS3-205ENST00000478525 PCSK9Q8NBP7 692 aaKnown RBP4.2□□□□□ -1.74
HPS3-205ENST00000478525 SOCS4Q8WXH5 440 aa4.2□□□□□ -1.74
HPS3-205ENST00000478525 EFHD1Q9BUP0 239 aa4.2□□□□□ -1.74
HPS3-205ENST00000478525 TCRBV5S1A1TA0A578 114 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 GABRDO14764 452 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 DSCR3O14972 297 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 ZRANB2O95218 330 aaKnown RBP eCLIP4.19□□□□□ -1.74
HPS3-205ENST00000478525 ALPLP05186 524 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 TMEM191BP0C7N4 346 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 ODF1Q14990 250 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 CYP1B1Q16678 543 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 TBC1D25Q3MII6 688 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 RNASE12Q5GAN4 147 aaKnown RBP4.19□□□□□ -1.74
HPS3-205ENST00000478525 EFCAB2Q5VUJ9 269 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 PNMA8AQ86V59 439 aaPredicted RBP4.19□□□□□ -1.74
HPS3-205ENST00000478525 CUL5Q93034 780 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 CCDC8Q9H0W5 538 aaPredicted RBP4.19□□□□□ -1.74
HPS3-205ENST00000478525 LMBRD1Q9NUN5 540 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 PCDHA1Q9Y5I3 950 aa4.19□□□□□ -1.74
HPS3-205ENST00000478525 hCG_1984214I3L0E3 225 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 SLC16A6O15403 523 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 UNC5CO95185 931 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 OAZ2O95190 189 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 FTLP02792 175 aaPredicted RBP4.18□□□□□ -1.74
HPS3-205ENST00000478525 CSF1RP07333 972 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 DLDP09622 509 aaKnown RBP4.18□□□□□ -1.74
HPS3-205ENST00000478525 TYRP14679 529 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 HTR6P50406 440 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 MTMR1Q13613 665 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 E2F2Q14209 437 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 FAM187BQ17R55 369 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 LEXMQ3ZCV2 418 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 DEPDC1Q5TB30 811 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 THEMIS2Q5TEJ8 643 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 DPY19L3Q6ZPD9 716 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 PIP4P1Q86T03 277 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 ACRBPQ8NEB7 543 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 MMS19Q96T76 1030 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 FOXP1Q9H334 677 aaPredicted RBP4.18□□□□□ -1.74
HPS3-205ENST00000478525 ASIC5Q9NY37 505 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 MRPS17Q9Y2R5 130 aaKnown RBP4.18□□□□□ -1.74
HPS3-205ENST00000478525 PRKAB1Q9Y478 270 aa4.18□□□□□ -1.74
HPS3-205ENST00000478525 CD8B2A6NJW9 211 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 ABLIM3O94929 683 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 HDCP19113 662 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 KRTAP5-9P26371 169 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 ADORA2AP29274 412 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 PDE6CP51160 858 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 MAP2K6P52564 334 aa4.17□□□□□ -1.74
HPS3-205ENST00000478525 E2F1Q01094 437 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms