RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CTTNBP2NLQ9P2B4 639 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 FEZ2Q9UHY8 353 aaPredicted RBP5.28□□□□□ -1.56
SF3B6-202ENST00000478050 KCNG1Q9UIX4 513 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 PPP1R9AQ9ULJ8 1098 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 COQ4Q9Y3A0 265 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 SAMM50Q9Y512 469 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 AK5Q9Y6K8 562 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 UNC80Q8N2C7 3258 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 PTPRFP10586 1907 aa5.28□□□□□ -1.56
SF3B6-202ENST00000478050 MUC6Q6W4X9 2439 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 A0A087WUV0 522 aaPredicted RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 H0YCG3 227 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PODXLO00592 558 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 WNT10BO00744 389 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PRRG2O14669 202 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 SLC16A4O15374 487 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 TTI1O43156 1089 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 DAPK3O43293 454 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 CTNND1O60716 968 aaKnown RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PPFIA2O75334 1257 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 KRT14P02533 472 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 FTLP02792 175 aaPredicted RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 ADRB2P07550 413 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 CD8BP10966 210 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 MYCLP12524 364 aaPredicted RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 ITGA4P13612 1032 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 EDN3P14138 238 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 VCAM1P19320 739 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 SCP2P22307 547 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 RPS12P25398 132 aaKnown RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 CTNNA2P26232 953 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 CHRNA3P32297 505 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 CTNNA1P35221 906 aaKnown RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 MDH1P40925 334 aaKnown RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 GCLMP48507 274 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 CCT5P48643 541 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 GPC3P51654 580 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 CDR1P51861 262 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 OAZ1P54368 228 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PEX3P56589 373 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 RTP1P59025 263 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 RPS6P62753 249 aaKnown RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 DLG4P78352 724 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 DR1Q01658 176 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 MESP2Q0VG99 397 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 DMP1Q13316 513 aaPredicted RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PRPF4BQ13523 1007 aaKnown RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 UAP1Q16222 522 aaPredicted RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PTPROQ16827 1216 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 C1orf220Q5T0J3 134 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 DCAF12L1Q5VU92 463 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 ARHGEF16Q5VV41 709 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 KCTD16Q68DU8 428 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 DUPD1Q68J44 220 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 KRT39Q6A163 491 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 RNF207Q6ZRF8 634 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 MICALCLQ6ZW33 695 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 ENOSF1Q7L5Y1 443 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 MAEAQ7L5Y9 396 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 TMC3Q7Z5M5 1100 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 DNAAF5Q86Y56 855 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 C10orf67Q8IYJ2 551 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 CPXCR1Q8N123 301 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 SH2D3CQ8N5H7 860 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 C3orf20Q8ND61 904 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 MCPH1Q8NEM0 835 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PLEKHO2Q8TD55 490 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 NETO1Q8TDF5 533 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 SLC20A1Q8WUM9 679 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PPM1EQ8WY54 764 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 SHC3Q92529 594 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 ATP6V0A1Q93050 837 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 GPRASP2Q96D09 838 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 NT5C1BQ96P26 610 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 TAAR1Q96RJ0 339 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 RMDN3Q96TC7 470 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 FMO2Q99518 471 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 ZSWIM1Q9BR11 485 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PDCD2LQ9BRP1 358 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 ERP44Q9BS26 406 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PAGR1Q9BTK6 254 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 C1QTNF1Q9BXJ1 281 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 MOV10L1Q9BXT6 1211 aaKnown RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 FAM129AQ9BZQ8 928 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 TMEM117Q9H0C3 514 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 THAP2Q9H0W7 228 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 EPN3Q9H201 632 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PLEKHA4Q9H4M7 779 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 ACSS3Q9H6R3 686 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 AS3MTQ9HBK9 375 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 RAVER2Q9HCJ3 691 aaKnown RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 TMEM8AQ9HCN3 771 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 MYOZ2Q9NPC6 264 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 KMT5AQ9NQR1 393 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 PXMP2Q9NR77 195 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 TAS2R14Q9NYV8 317 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.27□□□□□ -1.57
SF3B6-202ENST00000478050 UVRAGQ9P2Y5 699 aa5.27□□□□□ -1.57
SF3B6-202ENST00000478050 AMACRQ9UHK6 382 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms