RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TM7SF3Q9NS93 570 aa7.94□□□□□ -1.14
SPTLC1-205ENST00000477888 CALCOCO1Q9P1Z2 691 aa7.94□□□□□ -1.14
SPTLC1-205ENST00000477888 SUSD2Q9UGT4 822 aa7.94□□□□□ -1.14
SPTLC1-205ENST00000477888 KCNJ14Q9UNX9 436 aa7.94□□□□□ -1.14
SPTLC1-205ENST00000477888 MYMKA6NI61 221 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 PLK4O00444 970 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 CILPO75339 1184 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 ZNF217O75362 1048 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 KAT7O95251 611 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 DEXIO95424 95 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 NFATC1O95644 943 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 NTRK1P04629 796 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 PDIA4P13667 645 aaKnown RBP7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 GNSP15586 552 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 CYP3A5P20815 502 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 PDIA3P30101 505 aaKnown RBP7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 TNFRSF4P43489 277 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 LILRA4P59901 499 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 CCT2P78371 535 aaKnown RBP7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 ZXDBP98169 803 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 BNC1Q01954 994 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 TLE3Q04726 772 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 SSRP1Q08945 709 aaKnown RBP7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 SMARCB1Q12824 385 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 MYO1EQ12965 1108 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 KRT32Q14532 448 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 ZC2HC1CQ53FD0 456 aaPredicted RBP7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 PIK3AP1Q6ZUJ8 805 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 TAS1R3Q7RTX0 852 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 TMPRSS12Q86WS5 348 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 TRIM22Q8IYM9 498 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 RGL4Q8IZJ4 473 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 OXER1Q8TDS5 423 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 SH3RF2Q8TEC5 729 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 C2orf15Q8WU43 125 aaKnown RBP7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 DNASE2BQ8WZ79 361 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 MYRFLQ96LU7 910 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 PNKPQ96T60 521 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 MRPL4Q9BYD3 311 aaKnown RBP7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 TMEM134Q9H6X4 195 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 GAREM1Q9H706 876 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 GCNT4Q9P109 453 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 FNDC3AQ9Y2H6 1198 aaKnown RBP7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 PCDHGB2Q9Y5G2 931 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 PI4KAP42356 2102 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 TEX15Q9BXT5 2789 aa7.93□□□□□ -1.14
SPTLC1-205ENST00000477888 NUP210Q8TEM1 1887 aaPredicted RBP7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 KIF26AQ9ULI4 1882 aaPredicted RBP7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 SHROOM3Q8TF72 1996 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 A0A1B0GTW7 788 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 A0A1W2PQF6 199 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 GOLGA8CPA6NN73 597 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 FLRT2O43155 660 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 TNFSF14O43557 240 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 MED24O75448 989 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 CYP17A1P05093 508 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 CYP11A1P05108 521 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 USP17L7P0C7H9 530 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 CSH1P0DML2 217 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 CSH2P0DML3 217 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 C6P13671 934 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 EIF2DP41214 584 aaKnown RBP7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 GRIA2P42262 883 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 TXKP42681 527 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 CSRP3P50461 194 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 SEMG2Q02383 582 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 SPAG1Q07617 926 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 HLA-BQ31612 363 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 SEZ6Q53EL9 994 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 TAF1BQ53T94 588 aaPredicted RBP7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 COLEC12Q5KU26 742 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 WDR45BQ5MNZ6 344 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 SYCP2LQ5T4T6 812 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 MPZL3Q6UWV2 235 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 DHRS13Q6UX07 377 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 C12orf40Q86WS4 652 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 PHTF2Q8N3S3 785 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 ARL14EPQ8N8R7 260 aaPredicted RBP7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 STKLD1Q8NE28 680 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 TTC16Q8NEE8 873 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 SNIP1Q8TAD8 396 aaKnown RBP7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 SPATA18Q8TC71 538 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 SPPL2BQ8TCT7 592 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 NXPE2Q96DL1 559 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 ZBTB45Q96K62 511 aaPredicted RBP7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 IFT74Q96LB3 600 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 SENP8Q96LD8 212 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 YTHDC1Q96MU7 727 aaKnown RBP7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 MTMR9Q96QG7 549 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 TCHPQ9BT92 498 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 PLEKHA5Q9HAU0 1116 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 CD248Q9HCU0 757 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 HCN2Q9UL51 889 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 ARHGAP26Q9UNA1 814 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 MAGED2Q9UNF1 606 aaPredicted RBP7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 BTBD3Q9Y2F9 522 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 NFE2L3Q9Y4A8 694 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 STK36Q9NRP7 1315 aa7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 TNRC6BQ9UPQ9 1833 aaKnown RBP7.92□□□□□ -1.14
SPTLC1-205ENST00000477888 PTPN13Q12923 2485 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms