RNA–Protein interactions for RNA: ENST00000477558.1

VPS45-207, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,425 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-207ENST00000477558 IWS1Q96ST2 819 aa5.95□□□□□ -1.46
VPS45-207ENST00000477558 PDCD2LQ9BRP1 358 aa5.95□□□□□ -1.46
VPS45-207ENST00000477558 TACO1Q9BSH4 297 aaKnown RBP5.95□□□□□ -1.46
VPS45-207ENST00000477558 UPF3AQ9H1J1 476 aaKnown RBP5.95□□□□□ -1.46
VPS45-207ENST00000477558 VAT1LQ9HCJ6 419 aa5.95□□□□□ -1.46
VPS45-207ENST00000477558 ACSS2Q9NR19 701 aa5.95□□□□□ -1.46
VPS45-207ENST00000477558 PXMP2Q9NR77 195 aa5.95□□□□□ -1.46
VPS45-207ENST00000477558 ARHGAP20Q9P2F6 1191 aa5.95□□□□□ -1.46
VPS45-207ENST00000477558 ADD3Q9UEY8 706 aaKnown RBP5.95□□□□□ -1.46
VPS45-207ENST00000477558 CTDP1Q9Y5B0 961 aaPredicted RBP5.95□□□□□ -1.46
VPS45-207ENST00000477558 WDR81Q562E7 1941 aa5.95□□□□□ -1.46
VPS45-207ENST00000477558 ANKRD62A6NC57 917 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 DHX16O60231 1041 aaKnown RBP5.94□□□□□ -1.46
VPS45-207ENST00000477558 DUSP11O75319 330 aaKnown RBP5.94□□□□□ -1.46
VPS45-207ENST00000477558 EYA4O95677 639 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 AKR1A1P14550 325 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 SOX10P56693 466 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 ACVR2BQ13705 512 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 RABEP1Q15276 862 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 ESRP1Q6NXG1 681 aaKnown RBP5.94□□□□□ -1.46
VPS45-207ENST00000477558 CCDC62Q6P9F0 684 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 RTN4RL1Q86UN2 441 aaPredicted RBP5.94□□□□□ -1.46
VPS45-207ENST00000477558 KLHDC9Q8NEP7 349 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 IL31RAQ8NI17 732 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 ZSCAN18Q8TBC5 510 aaPredicted RBP5.94□□□□□ -1.46
VPS45-207ENST00000477558 NSUN6Q8TEA1 469 aaKnown RBP5.94□□□□□ -1.46
VPS45-207ENST00000477558 USP7Q93009 1102 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 C16orf92Q96LL3 132 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 INPP4AQ96PE3 977 aaPredicted RBP5.94□□□□□ -1.46
VPS45-207ENST00000477558 DEFB118Q96PH6 123 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 TAAR1Q96RJ0 339 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 ZMYND12Q9H0C1 365 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 MS4A5Q9H3V2 200 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 RIC8AQ9NPQ8 531 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 SH3GLB2Q9NR46 395 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 SEC63Q9UGP8 760 aaKnown RBP5.94□□□□□ -1.46
VPS45-207ENST00000477558 ZFP69BQ9UJL9 534 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 DDX49Q9Y6V7 483 aaKnown RBP5.94□□□□□ -1.46
VPS45-207ENST00000477558 SYNRGQ9UMZ2 1314 aa5.94□□□□□ -1.46
VPS45-207ENST00000477558 hCG_1642624A0A1W2PR95 340 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 LCHNA4D1U4 455 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 GCOM1H8Y6P7 765 aaPredicted RBP5.93□□□□□ -1.46
VPS45-207ENST00000477558 DNM1LO00429 736 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 DDX3XO00571 662 aaKnown RBP eCLIP5.93□□□□□ -1.46
VPS45-207ENST00000477558 ADAMTS3O15072 1205 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 EDIL3O43854 480 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 DEXIO95424 95 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 CFBP00751 764 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 CYP17A1P05093 508 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 POLR2MP0CAP2 368 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 FDPSP14324 419 aaKnown RBP5.93□□□□□ -1.46
VPS45-207ENST00000477558 EN2P19622 333 aaPredicted RBP5.93□□□□□ -1.46
VPS45-207ENST00000477558 CALML3P27482 149 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 LSSP48449 732 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 GJA9P57773 515 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 MRPS9P82933 396 aaKnown RBP5.93□□□□□ -1.46
VPS45-207ENST00000477558 SMAD3P84022 425 aaKnown RBP5.93□□□□□ -1.46
VPS45-207ENST00000477558 AMPD3Q01432 767 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 PGM5Q15124 567 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 SMAD2Q15796 467 aaKnown RBP5.93□□□□□ -1.46
VPS45-207ENST00000477558 DUSP28Q4G0W2 176 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 PRAMEF19Q5SWL8 479 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 XRRA1Q6P2D8 792 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 USP17L6PQ6QN14 398 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 FBXO16Q8IX29 292 aaPredicted RBP5.93□□□□□ -1.46
VPS45-207ENST00000477558 EFHBQ8N7U6 833 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 NSUN7Q8NE18 718 aaKnown RBP5.93□□□□□ -1.46
VPS45-207ENST00000477558 PHKBQ93100 1093 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 RMDN3Q96TC7 470 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 PSTPIP2Q9H939 334 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 EMC7Q9NPA0 242 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 GALNT8Q9NY28 637 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 CNPY2Q9Y2B0 182 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 Q9Y3F1 56 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 ASB1Q9Y576 335 aa5.93□□□□□ -1.46
VPS45-207ENST00000477558 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.92□□□□□ -1.46
VPS45-207ENST00000477558 SH3D21A4FU49 640 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 EIF3JO75822 258 aaKnown RBP5.92□□□□□ -1.46
VPS45-207ENST00000477558 STAM2O75886 525 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 CDKL5O76039 1030 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 ARIH2O95376 493 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 RARBP10826 455 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 RPL13P26373 211 aaKnown RBP5.92□□□□□ -1.46
VPS45-207ENST00000477558 HOXA13P31271 388 aaPredicted RBP5.92□□□□□ -1.46
VPS45-207ENST00000477558 ICAM3P32942 547 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 SREBF1P36956 1147 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 CCT2P78371 535 aaKnown RBP5.92□□□□□ -1.46
VPS45-207ENST00000477558 LRRC41Q15345 812 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 ATP13A4Q4VNC1 1196 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 TMEM63BQ5T3F8 832 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 TCERG1LQ5VWI1 586 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 HEATR3Q7Z4Q2 680 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 LINC01356Q8N9X3 169 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 DIS3LQ8TF46 1054 aaKnown RBP5.92□□□□□ -1.46
VPS45-207ENST00000477558 SCFD2Q8WU76 684 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 ZCCHC14Q8WYQ9 949 aaKnown RBP5.92□□□□□ -1.46
VPS45-207ENST00000477558 CUL5Q93034 780 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 TTC1Q99614 292 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 SLC26A6Q9BXS9 759 aa5.92□□□□□ -1.46
VPS45-207ENST00000477558 GLT8D2Q9H1C3 349 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms