RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 SEC24BO95487 1268 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 KLF8O95600 359 aaPredicted RBP7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 NFATC1O95644 943 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 PIGRP01833 764 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 CEACAM1P13688 526 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 HOXB3P14651 431 aaPredicted RBP7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 HDCP19113 662 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 PLCG1P19174 1290 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 ANXA13P27216 316 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 ABCD1P33897 745 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 TIE1P35590 1138 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 DDIT3P35638 169 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 PNPLA4P41247 253 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 IRX4P78413 519 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 CYP27A1Q02318 531 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 KDSRQ06136 332 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 USP4Q13107 963 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 ZNF268Q14587 947 aaPredicted RBP7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 ZNF77Q15935 545 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 CCDC142Q17RM4 750 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 EML3Q32P44 896 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 TMEM119Q4V9L6 283 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 INTS6LQ5JSJ4 861 aaKnown RBP7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 HYIQ5T013 277 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 LMBRD2Q68DH5 695 aaPredicted RBP7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 SLFN12LQ6IEE8 588 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 LPCAT2Q7L5N7 544 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 DYMQ7RTS9 669 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 TMEFF1Q8IYR6 380 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 SYCP3Q8IZU3 236 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 PDCL2Q8N4E4 241 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 ALLCQ8N6M5 410 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 MDGA1Q8NFP4 955 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 CCDC26Q8TAB7 109 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 HMGB4Q8WW32 186 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 RLN3Q8WXF3 142 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 EZH1Q92800 747 aaPredicted RBP7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 SAAL1Q96ER3 474 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 SLC22A12Q96S37 553 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 FAM213AQ9BRX8 229 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 IKZF4Q9H2S9 585 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 TMEM206Q9H813 350 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 ZDHHC4Q9NPG8 344 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 TBC1D7Q9P0N9 293 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 EBF1Q9UH73 591 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 L1RE1Q9UN81 338 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 LHX6Q9UPM6 363 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 C2CD2Q9Y426 696 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 SNX9Q9Y5X1 595 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 AKAP13Q12802 2813 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 ADAMTS20P59510 1910 aa7.17□□□□□ -1.26
RTFDC1-206ENST00000477485 SPAARA0A1B0GVQ0 90 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 TCRBV21S2A2A0A5A6 115 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 TMEM8BA6NDV4 472 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 ANTXRLA6NF34 631 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 MYMKA6NI61 221 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 SRRM3A6NNA2 597 aaPredicted RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 HCRTO43612 131 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 NOL4O94818 638 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 ADRB2P07550 413 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 TMEM191BP0C7N4 346 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 SCP2P22307 547 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 GRIK1P39086 918 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 PDE6CP51160 858 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 PSMC1P62191 440 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 SIM1P81133 766 aaPredicted RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 LMAN2Q12907 356 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 ACAP1Q15027 740 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 C4orf50Q6ZRC1 276 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 FILIP1Q7Z7B0 1213 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 SFR1Q86XK3 245 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 ADGRF2Q8IZF7 708 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 HDDC3Q8N4P3 179 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 KCTD17Q8N5Z5 321 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 DEFB119Q8N690 84 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 CSGALNACT2Q8N6G5 542 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 KRI1Q8N9T8 703 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 TXNDC5Q8NBS9 432 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 USP33Q8TEY7 942 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 WHAMMQ8TF30 809 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 CACTINQ8WUQ7 758 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 LARP4BQ92615 738 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 RAD54LQ92698 747 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 ERLEC1Q96DZ1 483 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 TRMT2BQ96GJ1 504 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 FAM84AQ96KN4 292 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 CNOT6LQ96LI5 555 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 LINC00597Q9H2U6 94 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 MRPL44Q9H9J2 332 aaKnown RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 POLMQ9NP87 494 aaPredicted RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 FSCN3Q9NQT6 498 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 SMPD4Q9NXE4 827 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 RBAKQ9NYW8 714 aaPredicted RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 MAGEC2Q9UBF1 373 aaPredicted RBP7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 MMP17Q9ULZ9 603 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 ATRXP46100 2492 aa7.16□□□□□ -1.26
RTFDC1-206ENST00000477485 GOLGA8IPA6NC78 632 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 GOLGA8JA6NMD2 632 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 SOBPA7XYQ1 873 aa7.15□□□□□ -1.26
RTFDC1-206ENST00000477485 K7EQS6 105 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms