RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-215ENST00000476664 SMC1AQ14683 1233 aaKnown RBP7.55□□□□□ -1.2
LRCH3-215ENST00000476664 SMAD1Q15797 465 aaKnown RBP7.55□□□□□ -1.2
LRCH3-215ENST00000476664 GAB4Q2WGN9 574 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 ARHGAP15Q53QZ3 475 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 SLC9C2Q5TAH2 1124 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 RRAGBQ5VZM2 374 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 NFRKBQ6P4R8 1299 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 PAOXQ6QHF9 649 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 ZPBP2Q6X784 338 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 C1orf229Q6ZS94 237 aaPredicted RBP7.55□□□□□ -1.2
LRCH3-215ENST00000476664 THAP5Q7Z6K1 395 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 PPP1R3BQ86XI6 285 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 KRT73Q86Y46 540 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 ARMC8Q8IUR7 673 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 LMNTD2Q8IXW0 634 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 TMEM57Q8N5G2 664 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 TBC1D22AQ8WUA7 517 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 CLEC4DQ8WXI8 215 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 MAML1Q92585 1016 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 HIC2Q96JB3 615 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 CNDP2Q96KP4 475 aaKnown RBP7.55□□□□□ -1.2
LRCH3-215ENST00000476664 PPP1R9BQ96SB3 815 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 TSPAN18Q96SJ8 248 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 MRPL46Q9H2W6 279 aaKnown RBP7.55□□□□□ -1.2
LRCH3-215ENST00000476664 PRO3102Q9H379 93 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 SYNCQ9H7C4 482 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 ABCF3Q9NUQ8 709 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 PLA2G2EQ9NZK7 142 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 BTBD7Q9P203 1132 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 TNFRSF10DQ9UBN6 386 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 MTO1Q9Y2Z2 717 aaKnown RBP7.55□□□□□ -1.2
LRCH3-215ENST00000476664 SNX8Q9Y5X2 465 aa7.55□□□□□ -1.2
LRCH3-215ENST00000476664 RPTORQ8N122 1335 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 CACNA1SQ13698 1873 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 MYH14Q7Z406 1995 aaKnown RBP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 MBD3L4A6NDZ8 208 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 MBD3L3A6NE82 208 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 H3BM21 787 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 AP3D1O14617 1153 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 TSPAN9O75954 239 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 PORP16435 677 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 KLRC1P26715 233 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 PRDX5P30044 214 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 ECHS1P30084 290 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 PRKAA2P54646 552 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 MAP3K12Q12852 859 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 HABP2Q14520 560 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 RASA2Q15283 850 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 ATPAF1Q5TC12 328 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 LRCH2Q5VUJ6 765 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 NUGGCQ68CJ6 796 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 GALNTL5Q7Z4T8 443 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 MICU3Q86XE3 530 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 FAM129CQ86XR2 697 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 DEFB123Q8N688 67 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 FLCNQ8NFG4 579 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 IFI44Q8TCB0 444 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 CREB3L4Q8TEY5 395 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 BCL7CQ8WUZ0 217 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 SEC14L1Q92503 715 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 PIGBQ92521 554 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 HOXB13Q92826 284 aaPredicted RBP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 RAB24Q969Q5 203 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 RBM15Q96T37 977 aaKnown RBP eCLIP7.54□□□□□ -1.24e-6■■■■□ 19.3
LRCH3-215ENST00000476664 YME1L1Q96TA2 773 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 RTKNQ9BST9 563 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 TWSG1Q9GZX9 223 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 SMURF2Q9HAU4 748 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 PRDM8Q9NQV8 689 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 EIF2B3Q9NR50 452 aaKnown RBP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 TBC1D23Q9NUY8 699 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 UCKL1Q9NWZ5 548 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 ADD3Q9UEY8 706 aaKnown RBP7.54□□□□□ -1.2
LRCH3-215ENST00000476664 CNPY2Q9Y2B0 182 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 HS3ST4Q9Y661 456 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 CYP46A1Q9Y6A2 500 aa7.54□□□□□ -1.2
LRCH3-215ENST00000476664 TTC21BQ7Z4L5 1316 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 NRXN2Q9P2S2 1712 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 H0YIN7 160 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 PYCARD-AS1I3L0S3 204 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 ST8SIA5O15466 376 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 CUTAO60888 179 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 TBCAO75347 108 aaKnown RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 SEC24DO94855 1032 aaPredicted RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 GLP2RO95838 553 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 NTRK1P04629 796 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 PRKCBP05771 671 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 MTHFD1P11586 935 aaKnown RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 ATP6V1B1P15313 513 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 GLB1P16278 677 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 MAP4P27816 1152 aaKnown RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 TM4SF1P30408 202 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 SRSF11Q05519 484 aaKnown RBP7.53□□□□□ -1.2
LRCH3-215ENST00000476664 MGAT5Q09328 741 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 ACVR2BQ13705 512 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 SCARB2Q14108 478 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 ANKRD1Q15327 319 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 NFKBIBQ15653 356 aa7.53□□□□□ -1.2
LRCH3-215ENST00000476664 MAPKAPK3Q16644 382 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms