RNA–Protein interactions for RNA: ENST00000476289.5

CHKB-207, Transcript of choline kinase beta, humanhuman

TSL 5

Gene CHKB, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-207ENST00000476289 SCARA5Q6ZMJ2 495 aa34.36■■■■□ 3.09
CHKB-207ENST00000476289 SMYD4Q8IYR2 804 aaPredicted RBP34.36■■■■□ 3.09
CHKB-207ENST00000476289 CSGALNACT1Q8TDX6 532 aa34.36■■■■□ 3.09
CHKB-207ENST00000476289 ZNF638Q14966 1978 aaKnown RBP34.36■■■■□ 3.09
CHKB-207ENST00000476289 AKAP3O75969 853 aa34.35■■■■□ 3.09
CHKB-207ENST00000476289 PTPN1P18031 435 aaKnown RBP34.35■■■■□ 3.09
CHKB-207ENST00000476289 ARHGAP29Q52LW3 1261 aa34.35■■■■□ 3.09
CHKB-207ENST00000476289 ASCL5Q7RTU5 278 aa34.35■■■■□ 3.09
CHKB-207ENST00000476289 MON1AQ86VX9 555 aa34.35■■■■□ 3.09
CHKB-207ENST00000476289 CELF5Q8N6W0 485 aaKnown RBP34.35■■■■□ 3.09
CHKB-207ENST00000476289 FAM3CQ92520 227 aa34.35■■■■□ 3.09
CHKB-207ENST00000476289 USP13Q92995 863 aaPredicted RBP34.35■■■■□ 3.09
CHKB-207ENST00000476289 SDCBP2Q9H190 292 aa34.35■■■■□ 3.09
CHKB-207ENST00000476289 SPATA6Q9NWH7 488 aaPredicted RBP34.35■■■■□ 3.09
CHKB-207ENST00000476289 ANAPC1Q9H1A4 1944 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 A8MXQ7 604 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 CLSTN1O94985 981 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 AVPR1AP37288 418 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 GRIK1P39086 918 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 SOX9P48436 509 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 ZCWPW2Q504Y3 356 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 ZNF667Q5HYK9 610 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 SV2AQ7L0J3 742 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 ENGASEQ8NFI3 743 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 TTC8Q8TAM2 541 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 SPATA17Q96L03 361 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 TMEM30AQ9NV96 361 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 GTSE1Q9NYZ3 720 aa34.34■■■■□ 3.09
CHKB-207ENST00000476289 GOLGA6L4A6NEF3 574 aa34.33■■■■□ 3.09
CHKB-207ENST00000476289 MAPK13O15264 365 aa34.33■■■■□ 3.09
CHKB-207ENST00000476289 NCAM2O15394 837 aa34.33■■■■□ 3.09
CHKB-207ENST00000476289 SP9P0CG40 484 aa34.33■■■■□ 3.09
CHKB-207ENST00000476289 CCNE1P24864 410 aa34.33■■■■□ 3.09
CHKB-207ENST00000476289 MAGEA9P43362 315 aa34.33■■■■□ 3.09
CHKB-207ENST00000476289 RPS9P46781 194 aaKnown RBP34.33■■■■□ 3.09
CHKB-207ENST00000476289 CACNA2D1P54289 1103 aa34.33■■■■□ 3.09
CHKB-207ENST00000476289 B3GALNT2Q8NCR0 500 aa34.33■■■■□ 3.09
CHKB-207ENST00000476289 RIN3Q8TB24 985 aa34.33■■■■□ 3.09
CHKB-207ENST00000476289 PRR23AA6NEV1 266 aa34.32■■■■□ 3.08
CHKB-207ENST00000476289 IKBKBO14920 756 aa34.32■■■■□ 3.08
CHKB-207ENST00000476289 VAMP7P51809 220 aa34.32■■■■□ 3.08
CHKB-207ENST00000476289 MLLT6P55198 1093 aaPredicted RBP34.32■■■■□ 3.08
CHKB-207ENST00000476289 USP46P62068 366 aa34.32■■■■□ 3.08
CHKB-207ENST00000476289 TNK2Q07912 1038 aa34.32■■■■□ 3.08
CHKB-207ENST00000476289 CCDC34Q96HJ3 373 aa34.32■■■■□ 3.08
CHKB-207ENST00000476289 SLC22A12Q96S37 553 aa34.32■■■■□ 3.08
CHKB-207ENST00000476289 B3GNT5Q9BYG0 378 aa34.32■■■■□ 3.08
CHKB-207ENST00000476289 ZNF518BQ9C0D4 1074 aa34.32■■■■□ 3.08
CHKB-207ENST00000476289 SOBPA7XYQ1 873 aa34.31■■■■□ 3.08
CHKB-207ENST00000476289 F8VP50 259 aa34.31■■■■□ 3.08
CHKB-207ENST00000476289 TRIM49P0CI25 452 aa34.31■■■■□ 3.08
CHKB-207ENST00000476289 TRIM49CP0CI26 452 aa34.31■■■■□ 3.08
CHKB-207ENST00000476289 KPNA1P52294 538 aaPredicted RBP34.31■■■■□ 3.08
CHKB-207ENST00000476289 TRPC7Q9HCX4 862 aa34.31■■■■□ 3.08
CHKB-207ENST00000476289 TDP1Q9NUW8 608 aa34.31■■■■□ 3.08
CHKB-207ENST00000476289 R4GN57 208 aa34.31■■■■□ 3.08
CHKB-207ENST00000476289 WDR87Q6ZQQ6 2873 aa34.31■■■■□ 3.08
CHKB-207ENST00000476289 CLDN5O00501 218 aa34.3■■■■□ 3.08
CHKB-207ENST00000476289 HLA-DRAP01903 254 aa34.3■■■■□ 3.08
CHKB-207ENST00000476289 FAM160A1Q05DH4 1040 aa34.3■■■■□ 3.08
CHKB-207ENST00000476289 SPOPLQ6IQ16 392 aa34.3■■■■□ 3.08
CHKB-207ENST00000476289 TXNDC11Q6PKC3 985 aa34.3■■■■□ 3.08
CHKB-207ENST00000476289 FAM186BQ8IYM0 893 aa34.3■■■■□ 3.08
CHKB-207ENST00000476289 NKD2Q969F2 451 aaPredicted RBP34.3■■■■□ 3.08
CHKB-207ENST00000476289 CEP295NLQ96MC4 621 aa34.3■■■■□ 3.08
CHKB-207ENST00000476289 C8orf33Q9H7E9 229 aaPredicted RBP34.3■■■■□ 3.08
CHKB-207ENST00000476289 FANCMQ8IYD8 2048 aa34.3■■■■□ 3.08
CHKB-207ENST00000476289 RIF1Q5UIP0 2472 aaKnown RBP34.29■■■■□ 3.08
CHKB-207ENST00000476289 CFAP54Q96N23 3096 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 SPECC1L-ADORA2AF8WAN1 911 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 TRIM66O15016 1216 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 LAMTOR5O43504 91 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 ASS1P00966 412 aaKnown RBP34.29■■■■□ 3.08
CHKB-207ENST00000476289 ANXA13P27216 316 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 PIK3CAP42336 1068 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 PLCB2Q00722 1185 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 PPP3CAQ08209 521 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 SGSM1Q2NKQ1 1148 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 DENND5BQ6ZUT9 1274 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 INTS8Q75QN2 995 aaKnown RBP34.29■■■■□ 3.08
CHKB-207ENST00000476289 ERCC4Q92889 916 aaPredicted RBP34.29■■■■□ 3.08
CHKB-207ENST00000476289 MSANTD3Q96H12 275 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 C8orf48Q96LL4 319 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 CYP2S1Q96SQ9 504 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 ELOVL4Q9GZR5 314 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 KIF9Q9HAQ2 790 aa34.29■■■■□ 3.08
CHKB-207ENST00000476289 THG1LQ9NWX6 298 aaKnown RBP34.29■■■■□ 3.08
CHKB-207ENST00000476289 C2orf78A6NCI8 922 aa34.28■■■■□ 3.08
CHKB-207ENST00000476289 RPL13P26373 211 aaKnown RBP34.28■■■■□ 3.08
CHKB-207ENST00000476289 CTHP32929 405 aa34.28■■■■□ 3.08
CHKB-207ENST00000476289 MTAPQ13126 283 aa34.28■■■■□ 3.08
CHKB-207ENST00000476289 ADAM9Q13443 819 aa34.28■■■■□ 3.08
CHKB-207ENST00000476289 WDR44Q5JSH3 913 aa34.28■■■■□ 3.08
CHKB-207ENST00000476289 EEF2KMTQ96G04 330 aa34.28■■■■□ 3.08
CHKB-207ENST00000476289 FAM83CQ9BQN1 747 aa34.28■■■■□ 3.08
CHKB-207ENST00000476289 TTLL2Q9BWV7 592 aa34.28■■■■□ 3.08
CHKB-207ENST00000476289 CHRDQ9H2X0 955 aa34.28■■■■□ 3.08
CHKB-207ENST00000476289 UTP3Q9NQZ2 479 aaKnown RBP eCLIP34.28■■■■□ 3.083e-12■■■■■ 64.6
CHKB-207ENST00000476289 GKN1Q9NS71 199 aa34.28■■■■□ 3.08
CHKB-207ENST00000476289 PSMC2P35998 433 aaKnown RBP34.27■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms