RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 MYH11P35749 1972 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 DCAF8L1A6NGE4 600 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 TRMUO75648 421 aaKnown RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 SGPL1O95470 568 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 CD48P09326 243 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 CPOXP36551 454 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 ETV4P43268 484 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 KDSRQ06136 332 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 SNAPC2Q13487 334 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 SF3B3Q15393 1217 aaKnown RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 TLR1Q15399 786 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 EFHC1Q5JVL4 640 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 HP1BP3Q5SSJ5 553 aaPredicted RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 PPP1R18Q6NYC8 613 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 ADGRD1Q6QNK2 874 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 ARHGEF19Q8IW93 802 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 CABLES1Q8TDN4 633 aa11.04□□□□□ -0.64
ABCF1-205ENST00000475993 HBS1LQ9Y450 684 aaKnown RBP11.04□□□□□ -0.64
ABCF1-205ENST00000475993 SNED1Q8TER0 1413 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 USP17L5A8MUK1 530 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 MATN2O00339 956 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 DKC1O60832 514 aaKnown RBP eCLIP11.03□□□□□ -0.64
ABCF1-205ENST00000475993 SPATA31C1P0DKV0 1188 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 CYP2C9P11712 490 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 HIRAP54198 1017 aaPredicted RBP11.03□□□□□ -0.64
ABCF1-205ENST00000475993 SPIRE1Q08AE8 756 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 LPIN1Q14693 890 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 DEPDC1Q5TB30 811 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 SHKBP1Q8TBC3 707 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 GIPC3Q8TF64 312 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 CCPG1Q9ULG6 757 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 TAF1LQ8IZX4 1826 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 E5RJQ4 531 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 MEIS1O00470 390 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 TXNDC9O14530 226 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 KLF11O14901 512 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 TBC1D12O60347 775 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 FDX1P10109 184 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 RALAP11233 206 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 RPA1P27694 616 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 MZF1P28698 734 aaPredicted RBP11.03□□□□□ -0.64
ABCF1-205ENST00000475993 GPX6P59796 221 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 FMO1Q01740 532 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 PPIDQ08752 370 aaKnown RBP11.03□□□□□ -0.64
ABCF1-205ENST00000475993 COG2Q14746 738 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 CROCCP3Q8IVE0 287 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 NSMCE3Q96MG7 304 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 FAM118BQ9BPY3 351 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 CCDC106Q9BWC9 280 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 GRIP2Q9C0E4 1043 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 CNTN3Q9P232 1028 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 RABGEF1Q9UJ41 708 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 GIT1Q9Y2X7 761 aa11.03□□□□□ -0.64
ABCF1-205ENST00000475993 CCNT2O60583 730 aaKnown RBP11.02□□□□□ -0.64
ABCF1-205ENST00000475993 TBCAO75347 108 aaKnown RBP11.02□□□□□ -0.64
ABCF1-205ENST00000475993 BGNP21810 368 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 FDFT1P37268 417 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 CCNIQ14094 377 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 HIC1Q14526 733 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 TBCCQ15814 346 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 USP41Q3LFD5 358 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 CENPUQ71F23 418 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 ZNF410Q86VK4 478 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 ICA1LQ8NDH6 482 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 NEDD1Q8NHV4 660 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 PIGBQ92521 554 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 CEP95Q96GE4 821 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 HEMGNQ9BXL5 484 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 ZNF696Q9H7X3 374 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 ZNHIT2Q9UHR6 403 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 STRIP2Q9ULQ0 834 aa11.02□□□□□ -0.64
ABCF1-205ENST00000475993 SH3PXD2BA1X283 911 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 CYP26A1O43174 497 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 DGKIO75912 1065 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 FBXO21O94952 628 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 NOVP48745 357 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 ACADVLP49748 655 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 BFSP1Q12934 665 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 APOFQ13790 326 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 EFTUD2Q15029 972 aaKnown RBP eCLIP11.02□□□□□ -0.651e-6■■■■□ 21.7
ABCF1-205ENST00000475993 SLC15A2Q16348 729 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 MDH1BQ5I0G3 518 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 PRPF39Q86UA1 669 aaKnown RBP11.02□□□□□ -0.65
ABCF1-205ENST00000475993 RAVER1Q8IY67 606 aaKnown RBP11.02□□□□□ -0.65
ABCF1-205ENST00000475993 FAM71AQ8IYT1 594 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 GLIS1Q8NBF1 620 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 JADE3Q92613 823 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 USP6NLQ92738 828 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 ERLEC1Q96DZ1 483 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 EYA3Q99504 573 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 PPARGC1AQ9UBK2 798 aaKnown RBP11.02□□□□□ -0.65
ABCF1-205ENST00000475993 ZBTB21Q9ULJ3 1066 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 SOX13Q9UN79 622 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 GOLGA8RI6L899 631 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 XPOTO43592 962 aaKnown RBP11.02□□□□□ -0.65
ABCF1-205ENST00000475993 GAP43P17677 238 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 EIF2B2P49770 351 aaKnown RBP11.02□□□□□ -0.65
ABCF1-205ENST00000475993 NCKAP1LP55160 1127 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 PLCB3Q01970 1234 aa11.02□□□□□ -0.65
ABCF1-205ENST00000475993 CREB5Q02930 508 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms