RNA–Protein interactions for RNA: ENST00000475873.2

USP4-209, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 536 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-209ENST00000475873 HSF5Q4G112 596 aaPredicted RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 BROXQ5VW32 411 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 CC2D1AQ6P1N0 951 aaPredicted RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 NFXL1Q6ZNB6 911 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 MON1AQ86VX9 555 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 GATAD2AQ86YP4 633 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 TICAM1Q8IUC6 712 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 DCBLD1Q8N8Z6 715 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 FANCBQ8NB91 859 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 TTC16Q8NEE8 873 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 OR10T2Q8NGX3 314 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 GIPC2Q8TF65 315 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 KCNE4Q8WWG9 221 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 TCP11Q8WWU5 503 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 BSNDQ8WZ55 320 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 CCDC136Q96JN2 1154 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 UROC1Q96N76 676 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 CCDC113Q9H0I3 377 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 MIR1-1HGQ9H1L0 117 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 KIF9Q9HAQ2 790 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 GPRC5CQ9NQ84 441 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 RGL1Q9NZL6 768 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 FTSJ1Q9UET6 329 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 EIF2B4Q9UI10 523 aaKnown RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 VAV3Q9UKW4 847 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 PCDHB8Q9UN66 801 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 NFE2L3Q9Y4A8 694 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 V9GY48 417 aaPredicted RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 COL27A1Q8IZC6 1860 aaPredicted RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 CCDC168Q8NDH2 2452 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 APCP25054 2843 aa5.25□□□□□ -1.57
USP4-209ENST00000475873 ZFC3H1O60293 1989 aaKnown RBP5.25□□□□□ -1.57
USP4-209ENST00000475873 PMS2P1A4D2B8 440 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 M0QZQ0 153 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 TRIM24O15164 1050 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 PAPSS1O43252 624 aaPredicted RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 MARCH6O60337 910 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 DXOO77932 396 aaKnown RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 FGF19O95750 216 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 NCAM1P13591 858 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 GLDCP23378 1020 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 COL8A1P27658 744 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 YWHABP31946 246 aaKnown RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 TNFSF9P41273 254 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 QARSP47897 775 aaKnown RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 IFNAR2P48551 515 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 INSM1Q01101 510 aaPredicted RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 FAM160A1Q05DH4 1040 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 KDSRQ06136 332 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 NCBP1Q09161 790 aaKnown RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 SRSF6Q13247 344 aaKnown RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 SART3Q15020 963 aaKnown RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 FAM187BQ17R55 369 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 SKIDA1Q1XH10 827 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 WDR45BQ5MNZ6 344 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 PRAMEF14Q5SWL7 426 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 SYCP2LQ5T4T6 812 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 DCAF12L1Q5VU92 463 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 EGFLAMQ63HQ2 1017 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 CDCA2Q69YH5 1023 aaPredicted RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 MICU3Q86XE3 530 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 SH3RF2Q8TEC5 729 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 RFFLQ8WZ73 363 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 EXTL1Q92935 676 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 RILPL2Q969X0 211 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 TOE1Q96GM8 510 aaKnown RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 POM121Q96HA1 1249 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 VCPIP1Q96JH7 1222 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 MRGPRX1Q96LB2 322 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 ZNF578Q96N58 590 aaPredicted RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 MTRQ99707 1265 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 LXNQ9BS40 222 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 GPR174Q9BXC1 333 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 LRRC2Q9BYS8 371 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 ZMYND12Q9H0C1 365 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 LRRC4CQ9HCJ2 640 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 WSB2Q9NYS7 404 aaPredicted RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 GCNT4Q9P109 453 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 RAD54BQ9Y620 910 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 CITO14578 2027 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 SVILO95425 2214 aa5.24□□□□□ -1.57
USP4-209ENST00000475873 ANKHD1Q8IWZ3 2542 aaKnown RBP5.24□□□□□ -1.57
USP4-209ENST00000475873 A0A087WWV3 80 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 C2orf78A6NCI8 922 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 METTL12A8MUP2 240 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 MEI4A8MW99 385 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 N4BP3O15049 544 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 PRC1O43663 620 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 SLC37A4O43826 429 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 HOXB2P14652 356 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 CD6P30203 668 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 MCM4P33991 863 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 AARSP49588 968 aaKnown RBP eCLIP5.23□□□□□ -1.57
USP4-209ENST00000475873 YWHAHQ04917 246 aaPredicted RBP5.23□□□□□ -1.57
USP4-209ENST00000475873 TRDNQ13061 729 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 TFDP1Q14186 410 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 DHCR24Q15392 516 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 ARL13BQ3SXY8 428 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 Q4G0T1 1027 aa5.23□□□□□ -1.57
USP4-209ENST00000475873 XKR9Q5GH70 373 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms