RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 CAPN11Q9UMQ6 739 aa23.51■■□□□ 1.35
MCF2L2-209ENST00000475664 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.51■■□□□ 1.35
MCF2L2-209ENST00000475664 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 GOLGA6L3A6NEY3 463 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 LRRC53A6NM62 1247 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 AP1G2O75843 785 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 POU2F2P09086 479 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 FAM200BP0CF97 657 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 GPR15P49685 360 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 BPIFB4P59827 614 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 RPL10AP62906 217 aaKnown RBP23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 TWF1Q12792 350 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 PLD1Q13393 1074 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 TRIM14Q14142 442 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 SKIV2LQ15477 1246 aaKnown RBP23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 CNGA2Q16280 664 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 LCLAT1Q6UWP7 414 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 EP400NLQ6ZTU2 488 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 TTC30AQ86WT1 665 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 SCN4BQ8IWT1 228 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 C12orf76Q8N812 135 aaPredicted RBP23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 ZNF606Q8WXB4 792 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 ZNF707Q96C28 371 aaPredicted RBP23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 UBE2ZQ9H832 354 aaPredicted RBP23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 CSNK1G1Q9HCP0 422 aa23.5■■□□□ 1.35
MCF2L2-209ENST00000475664 SPDYE4A6NLX3 237 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 TRIM66O15016 1216 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 THAP12O43422 761 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 LRG1P02750 347 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 CYP11B1P15538 503 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 GRIK1P39086 918 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 ALDH1A3P47895 512 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 DDR2Q16832 855 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 CLEC20AQ6ZU45 233 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 GPIHBP1Q8IV16 184 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 ANKRD52Q8NB46 1076 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 ZMIZ2Q8NF64 920 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 FEZF2Q8TBJ5 459 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 EPS8L1Q8TE68 723 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 C8orf48Q96LL4 319 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 SMOQ99835 787 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 DUSP16Q9BY84 665 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 PRKD2Q9BZL6 878 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 GRPEL1Q9HAV7 217 aa23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 DMAP1Q9NPF5 467 aaPredicted RBP23.49■■□□□ 1.35
MCF2L2-209ENST00000475664 CCDC195A0A1B0GUA6 201 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 F8VP50 259 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 CCL16O15467 120 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 MED7O43513 233 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 BEST1O76090 585 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 MICAL2O94851 1124 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 FERP16591 822 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 NPR3P17342 541 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 BCAT1P54687 386 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 ZBED6P86452 979 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 PKDCCQ504Y2 493 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 RARS2Q5T160 578 aaKnown RBP23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 E4F1Q66K89 784 aaPredicted RBP23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 TMC5Q6UXY8 1006 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 TMC6Q7Z403 805 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 NOP9Q86U38 636 aaKnown RBP23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 CPLX3Q8WVH0 158 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 KCNK16Q96T55 309 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 S1PR5Q9H228 398 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 HESX1Q9UBX0 185 aa23.48■■□□□ 1.35
MCF2L2-209ENST00000475664 EYSQ5T1H1 3165 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 ADCY5O95622 1261 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 CASP14P31944 242 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 PDE6CP51160 858 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 EPHB3P54753 998 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 TBX2Q13207 712 aaPredicted RBP23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 MEA1Q16626 185 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 SDHAF4Q5VUM1 108 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 FMNL3Q8IVF7 1028 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 DDX1Q92499 740 aaKnown RBP23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 SPATA17Q96L03 361 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 CEP295NLQ96MC4 621 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 AIPL1Q9NZN9 384 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 NOCTQ9UK39 431 aaKnown RBP23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 PCDHGC3Q9UN70 934 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 LUC7L2Q9Y383 392 aaKnown RBP23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 DOCK6Q96HP0 2047 aa23.47■■□□□ 1.35
MCF2L2-209ENST00000475664 XYLBO75191 536 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 CFHP08603 1231 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 ANXA13P27216 316 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 SSTR3P32745 418 aaPredicted RBP23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 MAP3K7CLP57077 242 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 ARID5AQ03989 594 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 SFMBT2Q5VUG0 894 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 CYP26C1Q6V0L0 522 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 IRF2BP2Q7Z5L9 587 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 GPR149Q86SP6 731 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 ZNF397Q8NF99 534 aaPredicted RBP23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 GPR152Q8TDT2 470 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 GIPC2Q8TF65 315 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 HLA-CQ95604 372 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 APOL5Q9BWW9 433 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 NUCKS1Q9H1E3 243 aaKnown RBP23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 ASB3Q9Y575 518 aa23.46■■□□□ 1.35
MCF2L2-209ENST00000475664 NOTCH4Q99466 2003 aa23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms