RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 TISP43B9A030 160 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 ANKRD63C9JTQ0 380 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 TRAK2O60296 914 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 NFATC1O95644 943 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 OPRD1P41143 372 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 MAPK8P45983 427 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 KCNB1Q14721 858 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 CRY1Q16526 586 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 ZC2HC1CQ53FD0 456 aaPredicted RBP17.09■□□□□ 0.33
ITGB1-211ENST00000475184 ADALQ6DHV7 355 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 LPCAT2Q7L5N7 544 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 TTC30AQ86WT1 665 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 PDCL2Q8N4E4 241 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 CCDC33Q8N5R6 958 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 ARL14EPQ8N8R7 260 aaPredicted RBP17.09■□□□□ 0.33
ITGB1-211ENST00000475184 OLIG1Q8TAK6 271 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 NUSAP1Q9BXS6 441 aaKnown RBP17.09■□□□□ 0.33
ITGB1-211ENST00000475184 LINC00597Q9H2U6 94 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 GCNT4Q9P109 453 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 MSRB2Q9Y3D2 182 aa17.09■□□□□ 0.33
ITGB1-211ENST00000475184 C2orf78A6NCI8 922 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 ANTXRLA6NF34 631 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 ALDH1A2O94788 518 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 TCF3P15923 654 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 ABCD1P33897 745 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 PNPLA4P41247 253 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 GTF2BQ00403 316 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 SLFN12LQ6IEE8 588 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 FSIP1Q8NA03 581 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 SPACA7Q96KW9 195 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 ACBD6Q9BR61 282 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 KLK13Q9UKR3 277 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 AGO2Q9UKV8 859 aaKnown RBP17.08■□□□□ 0.32
ITGB1-211ENST00000475184 CIZ1Q9ULV3 898 aaPredicted RBP17.08■□□□□ 0.32
ITGB1-211ENST00000475184 ARHGAP26Q9UNA1 814 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 PCDH15Q96QU1 1955 aa17.08■□□□□ 0.32
ITGB1-211ENST00000475184 SMG1Q96Q15 3661 aaKnown RBP17.07■□□□□ 0.32
ITGB1-211ENST00000475184 TNFRSF10BO14763 440 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 HNRNPLP14866 589 aaKnown RBP eCLIP17.07■□□□□ 0.321e-6■■□□□ 13.6
ITGB1-211ENST00000475184 ENGP17813 658 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 ACAT1P24752 427 aaKnown RBP17.07■□□□□ 0.32
ITGB1-211ENST00000475184 P2RY2P41231 377 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
ITGB1-211ENST00000475184 DHX8Q14562 1220 aaKnown RBP17.07■□□□□ 0.32
ITGB1-211ENST00000475184 GAB4Q2WGN9 574 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 INTS6LQ5JSJ4 861 aaKnown RBP17.07■□□□□ 0.32
ITGB1-211ENST00000475184 TMEM92Q6UXU6 159 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 ARMCX6Q7L4S7 300 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 SYT12Q8IV01 421 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 WHAMMQ8TF30 809 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 RLN3Q8WXF3 142 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 FNBP1Q96RU3 617 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 FIZ1Q96SL8 496 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 PKMYT1Q99640 499 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 ZHX3Q9H4I2 956 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 DDX43Q9NXZ2 648 aaKnown RBP17.07■□□□□ 0.32
ITGB1-211ENST00000475184 L1RE1Q9UN81 338 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 STYXL1Q9Y6J8 313 aa17.07■□□□□ 0.32
ITGB1-211ENST00000475184 CELSR3Q9NYQ7 3312 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 SPAARA0A1B0GVQ0 90 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 MAP3K13O43283 966 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 HUS1O60921 280 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 TBCAO75347 108 aaKnown RBP17.06■□□□□ 0.32
ITGB1-211ENST00000475184 IL18RAPO95256 599 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 KRT18P05783 430 aaKnown RBP17.06■□□□□ 0.32
ITGB1-211ENST00000475184 HDCP19113 662 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 POLR2BP30876 1174 aaKnown RBP17.06■□□□□ 0.32
ITGB1-211ENST00000475184 PTGER3P43115 390 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 PDE6CP51160 858 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 SIM1P81133 766 aaPredicted RBP17.06■□□□□ 0.32
ITGB1-211ENST00000475184 MRPS21P82921 87 aaKnown RBP17.06■□□□□ 0.32
ITGB1-211ENST00000475184 MYL7Q01449 175 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 CCDC142Q17RM4 750 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 CFAP221Q4G0U5 840 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 RILPL1Q5EBL4 403 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 LMBRD2Q68DH5 695 aaPredicted RBP17.06■□□□□ 0.32
ITGB1-211ENST00000475184 CRELD2Q6UXH1 353 aaPredicted RBP17.06■□□□□ 0.32
ITGB1-211ENST00000475184 PIP4P1Q86T03 277 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 NT5DC4Q86YG4 428 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 TMEFF1Q8IYR6 380 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 TMEM86AQ8N2M4 240 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 ALLCQ8N6M5 410 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 LRRC15Q8TF66 581 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 TMEM74BQ9NUR3 256 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 GTF3C4Q9UKN8 822 aa17.06■□□□□ 0.32
ITGB1-211ENST00000475184 UPK3BL1B0FP48 263 aa17.05■□□□□ 0.32
ITGB1-211ENST00000475184 UPK3BL2E5RIL1 263 aa17.05■□□□□ 0.32
ITGB1-211ENST00000475184 SLC26A4O43511 780 aa17.05■□□□□ 0.32
ITGB1-211ENST00000475184 CYP17A1P05093 508 aa17.05■□□□□ 0.32
ITGB1-211ENST00000475184 DPP6P42658 865 aa17.05■□□□□ 0.32
ITGB1-211ENST00000475184 SEMA3BQ13214 749 aa17.05■□□□□ 0.32
ITGB1-211ENST00000475184 LYSMD4Q5XG99 296 aa17.05■□□□□ 0.32
ITGB1-211ENST00000475184 ARL6IP4Q66PJ3 421 aaKnown RBP17.05■□□□□ 0.32
ITGB1-211ENST00000475184 SLC23A3Q6PIS1 610 aa17.05■□□□□ 0.32
ITGB1-211ENST00000475184 SPATA2LQ8IUW3 424 aaPredicted RBP17.05■□□□□ 0.32
ITGB1-211ENST00000475184 SCN4BQ8IWT1 228 aa17.05■□□□□ 0.32
ITGB1-211ENST00000475184 TXNDC5Q8NBS9 432 aaKnown RBP17.05■□□□□ 0.32
ITGB1-211ENST00000475184 POMGNT1Q8WZA1 660 aa17.05■□□□□ 0.32
ITGB1-211ENST00000475184 CALML4Q96GE6 196 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms