RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CDK11BP21127 795 aaKnown RBP7.45□□□□□ -1.22
LIMD1-204ENST00000474665 KLRC2P26717 231 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 CA8P35219 290 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 LHX1P48742 406 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 ZNF132P52740 706 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 CACNA2D1P54289 1103 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 RAD23BP54727 409 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 ARPP19P56211 112 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 TNNC1P63316 161 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 FANCCQ00597 558 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 GCNT1Q02742 428 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 SYCP1Q15431 976 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 WDR44Q5JSH3 913 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 INTS6LQ5JSJ4 861 aaKnown RBP7.45□□□□□ -1.22
LIMD1-204ENST00000474665 KLHDC7AQ5VTJ3 777 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 IQCEQ6IPM2 695 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 LLGL2Q6P1M3 1020 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 PDXDC1Q6P996 788 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 ACOT1Q86TX2 421 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 CRYBG2Q8N1P7 616 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 C12orf29Q8N999 325 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 SLC4A11Q8NBS3 891 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 OR6B3Q8NGW1 331 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 TFAP2BQ92481 460 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 ZNF707Q96C28 371 aaPredicted RBP7.45□□□□□ -1.22
LIMD1-204ENST00000474665 FAXDC2Q96IV6 333 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 NT5C1BQ96P26 610 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 PGLYRP2Q96PD5 576 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 ERGIC2Q96RQ1 377 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 CDCA3Q99618 268 aaPredicted RBP7.45□□□□□ -1.22
LIMD1-204ENST00000474665 SYT15Q9BQS2 421 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 APOL5Q9BWW9 433 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 EMILIN2Q9BXX0 1053 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 B3GNT5Q9BYG0 378 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 GPR88Q9GZN0 384 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 S1PR5Q9H228 398 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 GANQ9H2C0 597 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 ACP6Q9NPH0 428 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 CISHQ9NSE2 258 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 FBXW11Q9UKB1 542 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 GTF3C4Q9UKN8 822 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 ANGPTL2Q9UKU9 493 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 CNTN6Q9UQ52 1028 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 SSX2IPQ9Y2D8 614 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 FHOD1Q9Y613 1164 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 FRYLO94915 3013 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 PATJQ8NI35 1801 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 PRR5-ARHGAP8B1AHC4 643 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 FOXN3O00409 490 aaPredicted RBP7.44□□□□□ -1.22
LIMD1-204ENST00000474665 CLDN5O00501 218 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 SOAT2O75908 522 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 GLUD1P00367 558 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 PNMA6AP0CW24 399 aaPredicted RBP7.44□□□□□ -1.22
LIMD1-204ENST00000474665 CYP2F1P24903 491 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 PCSK1P29120 753 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 ARHGAP8P85298 464 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 UBXN1Q04323 297 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 ADCY1Q08828 1119 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 DUSP4Q13115 394 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 SLC39A12Q504Y0 691 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 MDH1BQ5I0G3 518 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 TPGS2Q68CL5 300 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 ANKRD54Q6NXT1 300 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 POTEHQ6S545 545 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 METTL23Q86XA0 190 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 TCEAL8Q8IYN2 117 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 FUKQ8N0W3 1084 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 PPM1KQ8N3J5 372 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 B3GALNT2Q8NCR0 500 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 MYCBPAPQ8TBZ2 947 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 SHC3Q92529 594 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 PCED1BQ96HM7 432 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 LSM14BQ9BX40 385 aaKnown RBP7.44□□□□□ -1.22
LIMD1-204ENST00000474665 IMPG2Q9BZV3 1241 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 SNX25Q9H3E2 840 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 UBE2TQ9NPD8 197 aaPredicted RBP7.44□□□□□ -1.22
LIMD1-204ENST00000474665 PLCB1Q9NQ66 1216 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 MAN1C1Q9NR34 630 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 IGSF5Q9NSI5 407 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 NCDNQ9UBB6 729 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 APEX2Q9UBZ4 518 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 AFF4Q9UHB7 1163 aaKnown RBP7.44□□□□□ -1.22
LIMD1-204ENST00000474665 CDH9Q9ULB4 789 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 ZMIZ1Q9ULJ6 1067 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 SLC27A5Q9Y2P5 690 aa7.44□□□□□ -1.22
LIMD1-204ENST00000474665 R3HCC1Q9Y3T6 440 aaKnown RBP7.44□□□□□ -1.22
LIMD1-204ENST00000474665 OBSL1O75147 1896 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 DENND4AQ7Z401 1863 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 ARHGEF37A1IGU5 675 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 A8MXQ7 604 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 C2CD4DB7Z1M9 353 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 PES1O00541 588 aaKnown RBP7.43□□□□□ -1.22
LIMD1-204ENST00000474665 ZMYND10O75800 440 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 GABBR2O75899 941 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 BEST1O76090 585 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 PROS1P07225 676 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 CFHP08603 1231 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 SP9P0CG40 484 aa7.43□□□□□ -1.22
LIMD1-204ENST00000474665 HAPLN1P10915 354 aaPredicted RBP7.43□□□□□ -1.22
LIMD1-204ENST00000474665 P4HA1P13674 534 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms