RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 ADORA2BP29275 332 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 GPD2P43304 727 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 NDUFV1P49821 464 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 PDE6CP51160 858 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 CACNA2D1P54289 1103 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 SMARCB1Q12824 385 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 STILQ15468 1287 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 MAPRE1Q15691 268 aaKnown RBP10.61□□□□□ -0.71
COL8A1-206ENST00000474648 NFE2Q16621 373 aaPredicted RBP10.61□□□□□ -0.71
COL8A1-206ENST00000474648 GOLGA7BQ2TAP0 167 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 CYP26C1Q6V0L0 522 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 RAD9BQ6WBX8 426 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 FAM35AQ86V20 835 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 PALB2Q86YC2 1186 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 TMTC1Q8IUR5 882 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 GLYCTKQ8IVS8 523 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 ANKRD52Q8NB46 1076 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 ZNF461Q8TAF7 563 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 UBA3Q8TBC4 463 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 MICAL1Q8TDZ2 1067 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 ZNF830Q96NB3 372 aaPredicted RBP10.61□□□□□ -0.71
COL8A1-206ENST00000474648 SMOQ99835 787 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 BAG1Q99933 345 aaPredicted RBP10.61□□□□□ -0.71
COL8A1-206ENST00000474648 DUSP16Q9BY84 665 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 RHOBTB2Q9BYZ6 727 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 DNAI2Q9GZS0 605 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 LHX5Q9H2C1 402 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 CSNK1G1Q9HCP0 422 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 AFF4Q9UHB7 1163 aaKnown RBP10.61□□□□□ -0.71
COL8A1-206ENST00000474648 ADAMTS1Q9UHI8 967 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 CYTH4Q9UIA0 394 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 NENFQ9UMX5 172 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 KIAA1671Q9BY89 1806 aa10.61□□□□□ -0.71
COL8A1-206ENST00000474648 VWA8A3KMH1 1905 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 TMEM265A0A087WTH1 108 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 A0A087X0T9 212 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 SOWAHDA6NJG2 315 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 TULP2O00295 520 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 CLASP2O75122 1294 aaKnown RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 CSPG5O95196 566 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 FAM228BP0C875 321 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 HAPLN1P10915 354 aaPredicted RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 UNGP13051 313 aaPredicted RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 CPB1P15086 417 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 ATF2P15336 505 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 BDNFP23560 247 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 CDH5P33151 784 aaPredicted RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 MAGEA11P43364 429 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 CCZ1BP86790 482 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 CCZ1P86791 482 aaPredicted RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 CYP27A1Q02318 531 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 CREMQ03060 361 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 PDE4CQ08493 712 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 ADCY1Q08828 1119 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 DUSP4Q13115 394 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 BMS1Q14692 1282 aaKnown RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 MTF1Q14872 753 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 GRIN2CQ14957 1233 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 CLEC16AQ2KHT3 1053 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 CFAP221Q4G0U5 840 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 TDRD12Q587J7 1177 aaKnown RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 TPGS2Q68CL5 300 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 C4orf50Q6ZRC1 276 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 ADGRD2Q7Z7M1 963 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 SPATA2LQ8IUW3 424 aaPredicted RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 PASD1Q8IV76 773 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 TTC9BQ8N6N2 239 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 ZMIZ2Q8NF64 920 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 C2orf15Q8WU43 125 aaKnown RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 SLC22A17Q8WUG5 538 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 SLC35F5Q8WV83 523 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 SECISBP2LQ93073 1101 aaKnown RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 MRPL38Q96DV4 380 aaKnown RBP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 FUBP3Q96I24 572 aaKnown RBP eCLIP10.6□□□□□ -0.71
COL8A1-206ENST00000474648 LRCH3Q96II8 777 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 PGLYRP2Q96PD5 576 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 MED10Q9BTT4 135 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 EMILIN2Q9BXX0 1053 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 UBXN6Q9BZV1 441 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 KCNF1Q9H3M0 494 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 ABCB6Q9NP58 842 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 TAS2R14Q9NYV8 317 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 MAFFQ9ULX9 164 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 SLC27A5Q9Y2P5 690 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 PCDHB5Q9Y5E4 795 aa10.6□□□□□ -0.71
COL8A1-206ENST00000474648 HHLA1C9JL84 531 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 ZNF263O14978 683 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 PER2O15055 1255 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 TGM5O43548 720 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 AP1G2O75843 785 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 C1RP00736 705 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 PTMAP06454 111 aaKnown RBP10.59□□□□□ -0.71
COL8A1-206ENST00000474648 ADH1AP07327 375 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 SPATA31D3P0C874 917 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 KLRC2P26717 231 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 ANXA13P27216 316 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 RPL34P49207 117 aaKnown RBP10.59□□□□□ -0.71
COL8A1-206ENST00000474648 CLCN4P51793 760 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 NOMO3P69849 1222 aa10.59□□□□□ -0.71
COL8A1-206ENST00000474648 PMF1Q6P1K2 205 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms