RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 PRDX6P30041 224 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 NMT1P30419 496 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 POLR2BP30876 1174 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 SFNP31947 248 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 CHKAP35790 457 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 STAT3P40763 770 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 SERPINB9P50453 376 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 JAK3P52333 1124 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 VCPP55072 806 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 POLE2P56282 527 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 YWHAEP62258 255 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 NOP14P78316 857 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 USP17L24Q0WX57 530 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 NFX1Q12986 1120 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 NAB1Q13506 487 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 MPP2Q14168 576 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 HADHQ16836 314 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 CTC1Q2NKJ3 1217 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 CEP55Q53EZ4 464 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 PCNX4Q63HM2 1172 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 XRRA1Q6P2D8 792 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 USP17L6PQ6QN14 398 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 MTDHQ86UE4 582 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 FAM160B2Q86V87 743 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 GPIHBP1Q8IV16 184 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 CROCCP3Q8IVE0 287 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 SULF1Q8IWU6 871 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 SCUBE1Q8IWY4 988 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 THNSL1Q8IYQ7 743 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 NIPA2Q8N8Q9 360 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 BANPQ8N9N5 519 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 UHMK1Q8TAS1 419 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 KCNV2Q8TDN2 545 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 SLC20A1Q8WUM9 679 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 C1orf54Q8WWF1 131 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 SPIRE2Q8WWL2 714 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 STON2Q8WXE9 905 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 OXNAD1Q96HP4 312 aaPredicted RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 HIC2Q96JB3 615 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 NLRP4Q96MN2 994 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 CATSPER2Q96P56 530 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 FNBP1Q96RU3 617 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 FIZ1Q96SL8 496 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 ECSITQ9BQ95 431 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 SYT15Q9BQS2 421 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 CADM1Q9BY67 442 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 PNPLA8Q9NP80 782 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 MRPL40Q9NQ50 206 aaKnown RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 NKX1-2Q9UD57 310 aaPredicted RBP8.4□□□□□ -1.06
CCDC93-208ENST00000474546 TBK1Q9UHD2 729 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 DAGLAQ9Y4D2 1042 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 TRANK1O15050 2925 aa8.4□□□□□ -1.06
CCDC93-208ENST00000474546 DCHS1Q96JQ0 3298 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 MYH11P35749 1972 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 IGLV3-22A0A075B6J6 115 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 TTC36A6NLP5 189 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 RSPH10B2B2RC85 870 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ANKRD63C9JTQ0 380 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 MEIS1O00470 390 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 FAM189A1O60320 539 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 LPXNO60711 386 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ENTPD5O75356 428 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 KRT38O76015 456 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ECM2O94769 699 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 UFL1O94874 794 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 SGPL1O95470 568 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 CYP1A1P04798 512 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 LYNP07948 512 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 SERPINA6P08185 405 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 RSPH10BP0C881 870 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 RALAP11233 206 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 BMP3P12645 472 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 RRM1P23921 792 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 KLRK1P26718 216 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ALDH1B1P30837 517 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 STIP1P31948 543 aaKnown RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 SHMT1P34896 483 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 RPA3P35244 121 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 COPB2P35606 906 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 RFC5P40937 340 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 MAGEA8P43361 318 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 KCNJ1P48048 391 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 MARCKSL1P49006 195 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ACADVLP49748 655 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 ARSEP51690 589 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 NCKAP1LP55160 1127 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 PSMC6P62333 389 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 SLC18A2Q05940 514 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 WASHC5Q12768 1159 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 DMP1Q13316 513 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 TMED1Q13445 227 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 TRPC3Q13507 836 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 HIC1Q14526 733 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 SNRNP35Q16560 246 aaKnown RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 PTPROQ16827 1216 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 CERKLQ49MI3 558 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 BRDTQ58F21 947 aaPredicted RBP8.39□□□□□ -1.07
CCDC93-208ENST00000474546 TFDP3Q5H9I0 405 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 PPP1R15BQ5SWA1 713 aa8.39□□□□□ -1.07
CCDC93-208ENST00000474546 RNASEH2BQ5TBB1 312 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms